RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RMDN2Q96LZ7 410 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 MYADMQ96S97 322 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC3Q9BQI4 270 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ARRDC1-AS1Q9H2J1 176 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 RETREG1Q9H6L5 497 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 DDX31Q9H8H2 851 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 OLFML3Q9NRN5 406 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CWC25Q9NXE8 425 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 DDX43Q9NXZ2 648 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 STK26Q9P289 416 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A0U1RQK1 487 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF320A2RRD8 509 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CAPN9O14815 690 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ST8SIA3O43173 380 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 SYNGR3O43761 229 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 XPNPEP2O43895 674 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 NR3C1P04150 777 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 T-ENOLP0DO92 83 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ADRA2CP18825 462 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 EEF1B2P24534 225 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ACAT1P24752 427 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 PSMB4P28070 264 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 COPB2P35606 906 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 MNDAP41218 407 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ASCL1P50553 236 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 LIMK1P53667 647 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 DVL1P1P54792 670 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 KRT83P78385 493 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 YWHAHQ04917 246 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 SCN1BQ07699 218 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 C17orf67Q0P5P2 114 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CUL3Q13618 768 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CTU2Q2VPK5 515 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 MCMDC2Q4G0Z9 681 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 C6orf136Q5SQH8 315 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CAPRIN2Q6IMN6 1127 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 OTOAQ7RTW8 1153 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 PIWIL3Q7Z3Z3 882 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 KLHL7Q8IXQ5 586 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CDK20Q8IZL9 346 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 OR1J1Q8NGS3 322 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 GDAP1Q8TB36 358 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 GRAPLQ8TC17 118 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 ATL1Q8WXF7 558 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 PIGBQ92521 554 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 BSCL2Q96G97 398 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 HES6Q96HZ4 224 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 LYZL4Q96KX0 146 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 LRRC3BQ96PB8 259 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 FN3KQ9H479 309 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 EVA1AQ9H8M9 152 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 UPF2Q9HAU5 1272 aaKnown RBP3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 CDH20Q9HBT6 801 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 GKN1Q9NS71 199 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 TAAR2Q9P1P5 351 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 WDR83OSQ9Y284 106 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 RIPK3Q9Y572 518 aa3.63□□□□□ -1.83
HMGB1P17-201ENST00000403495 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 FAM170AA1A519 330 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 HTR3EA5X5Y0 456 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 SMTNL1A8MU46 457 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC188H7C350 402 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCL24O00175 119 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 DNM1LO00429 736 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 WDR46O15213 610 aaKnown RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 INSIG1O15503 277 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PDE9AO76083 593 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 IGHV4-39P01824 125 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 HSP90AB1P08238 724 aaKnown RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 SNRNP70P08621 437 aaKnown RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PLA2G4BP0C869 781 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 DGKAP23743 735 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 OAS2P29728 719 aaKnown RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 WNT5AP41221 380 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 GMPSP49915 693 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PDX1P52945 283 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 FOXG1P55316 489 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 TUBB4BP68371 445 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PRKCZQ05513 592 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 KEAP1Q14145 624 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 SLMAPQ14BN4 828 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 UGT3A2Q3SY77 523 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 LACTB2Q53H82 288 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 ASPRV1Q53RT3 343 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 DCAF10Q5QP82 559 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PDSS1Q5T2R2 415 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 MOXD1Q6UVY6 613 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 C11orf57Q6ZUT1 292 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF771Q7L3S4 317 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 RTN4RL2Q86UN3 420 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 MMD2Q8IY49 270 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 APCDD1Q8J025 514 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF611Q8N823 705 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF713Q8N859 430 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 Q8N9P0 234 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 UXS1Q8NBZ7 420 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms