RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 CDHR3Q6ZTQ4 885 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 OTOAQ7RTW8 1153 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 TMEM135Q86UB9 458 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 CILP2Q8IUL8 1156 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 NAT8LQ8N9F0 302 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 GSDMBQ8TAX9 411 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 APOBEC4Q8WW27 367 aaKnown RBP14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 RAB11FIP5Q9BXF6 653 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 SLC25A18Q9H1K4 315 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 TRMT1Q9NXH9 659 aaKnown RBP14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 SERTAD3Q9UJW9 196 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 POLHQ9Y253 713 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 SEC16AO15027 2179 aa14.37□□□□□ -0.11
SMIM11A-203ENST00000399299 GOLGA8KD6RF30 607 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 GOLGA8TH3BQL2 631 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 KATNA1O75449 491 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 KLK3P07288 261 aaPredicted RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 CYP2A7P20853 494 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ATP5DP30049 168 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 PEBP1P30086 187 aaKnown RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 RORAP35398 523 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 GABRA4P48169 554 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ITGA1P56199 1179 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 NFATC3Q12968 1075 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 GRB7Q14451 532 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 GBX1Q14549 363 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 DEFB109BQ30KR1 87 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ANKRD20A4Q4UJ75 823 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 NEPROQ6NW34 567 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 TRIM73Q86UV7 250 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 PPIL6Q8IXY8 311 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 DSELQ8IZU8 1212 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 LINC01555Q8NAE3 123 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 SLC38A9Q8NBW4 561 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 SLC22A18Q96BI1 424 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 KLHL25Q9H0H3 589 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ACTL8Q9H568 366 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ACTR5Q9H9F9 607 aaPredicted RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 AKIRIN1Q9H9L7 192 aaPredicted RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 INTS10Q9NVR2 710 aaKnown RBP14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 PLAGL1Q9UM63 463 aa14.36□□□□□ -0.11
SMIM11A-203ENST00000399299 ZCWPW2A0A1B0GU75 182 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 ISM1B1AKI9 464 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 E7EQ34 232 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 H3BMH7 237 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 GOLGA8MH3BSY2 632 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 MEN1O00255 615 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 RASGRF2O14827 1237 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 ZNF185O15231 689 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 USP1O94782 785 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 FKBP9O95302 570 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 S1PR4O95977 384 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 HBQ1P09105 142 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 RAB40ALP0C0E4 278 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 CD9P21926 228 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 PTPN4P29074 926 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 CCNFP41002 786 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 RPS15P62841 145 aaKnown RBP14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 DHX34Q14147 1143 aaKnown RBP14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 ATP1A1-AS1Q5TC04 95 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 FAM199XQ6PEV8 388 aaPredicted RBP14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 TTC23LQ6PF05 361 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 CENPUQ71F23 418 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 SYVN1Q86TM6 617 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 GPR135Q8IZ08 494 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 OR2L8Q8NGY9 312 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 CFAP61Q8NHU2 1237 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 SLCO2A1Q92959 643 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 MR1Q95460 341 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 RAD51AP1Q96B01 352 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 ZNF669Q96BR6 464 aaPredicted RBP14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 DPH2Q9BQC3 489 aaPredicted RBP14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 FAM60AQ9NP50 221 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 PCMTD2Q9NV79 361 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 PCYOX1Q9UHG3 505 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 KCNMB2Q9Y691 235 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 MYO18BQ8IUG5 2567 aa14.35□□□□□ -0.11
SMIM11A-203ENST00000399299 FER1L5A0AVI2 2057 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 NIPSNAP2O75323 286 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 C1orf105O95561 183 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 FURINP09958 794 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 PKMP14618 531 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 FMO4P31512 558 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 THOC5Q13769 683 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 ERV3-1Q14264 604 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 PPP1R7Q15435 360 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 ZIC1Q15915 447 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 RNASEH2BQ5TBB1 312 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 PRAMEF17Q5VTA0 474 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 HMGCLL1Q8TB92 370 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 MAGEC3Q8TD91 643 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 N4BP2L2Q92802 583 aaPredicted RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 CLIP3Q96DZ5 547 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms