RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FAM117AQ9C073 453 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SPATA6Q9NWH7 488 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ANXA6P08133 673 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 UQCRBP14927 111 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 HNF1BP35680 557 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LRRC26Q2I0M4 334 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MAMSTRQ6ZN01 415 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 Q6ZSR9 355 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 CPNE9Q8IYJ1 553 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 KRT78Q8N1N4 520 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF420Q8TAQ5 688 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 VOPP1Q96AW1 172 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PTERQ96BW5 349 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MRGPRX3Q96LB0 322 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 AKTIPQ9H8T0 292 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 USE1Q9NZ43 259 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LIMD1Q9UGP4 676 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SAMD4AQ9UPU9 718 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 C2orf78A6NCI8 922 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 NCF2P19878 526 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 C1QTNF8P60827 252 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 TGM3Q08188 693 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ACSM2AQ08AH3 577 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ADPRMQ3LIE5 342 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 AGKQ53H12 422 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ACSM2BQ68CK6 577 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LCTLQ6UWM7 567 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 SLC15A3Q8IY34 581 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 ST13P4Q8IZP2 240 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 REXO5Q96IC2 774 aaKnown RBP5.73□□□□□ -1.49
PTPRD-206ENST00000397617 IPPKQ9H8X2 491 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PELI2Q9HAT8 420 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 LRTM1Q9HBL6 345 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 MAN1C1Q9NR34 630 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 AP4S1Q9Y587 144 aa5.73□□□□□ -1.49
PTPRD-206ENST00000397617 PCNX2A6NKB5 2137 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 LSM1O15116 133 aaKnown RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SUPT3HO75486 399 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CLEC3AO75596 197 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SNRNP200O75643 2136 aaKnown RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CCNDBP1O95273 360 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NR1H2P55055 460 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TIAL1Q01085 375 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GNA13Q14344 377 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MAPKAPK3Q16644 382 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SYCP2LQ5T4T6 812 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ICA1LQ8NDH6 482 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MDGA1Q8NFP4 955 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MOAP1Q96BY2 351 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SLC22A12Q96S37 553 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 POLE3Q9NRF9 147 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ARL15Q9NXU5 204 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MARCOQ9UEW3 520 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MSRAQ9UJ68 235 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ANGPTL3Q9Y5C1 460 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 BLACEA4D250 179 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 DRD1P21728 446 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 AHRP35869 848 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CDKN2DP55273 166 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 LRRC66Q68CR7 880 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM207Q6UWW9 146 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SLC43A2Q8N370 569 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SLC25A41Q8N5S1 370 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 OR52K2Q8NGK3 314 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 EZH1Q92800 747 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NSMCE2Q96MF7 247 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GABRG3Q99928 467 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CCNB1IP1Q9NPC3 277 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MCM8Q9UJA3 840 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 RIMS3Q9UJD0 308 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 C3orf18Q9UK00 162 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 DHRS12A0PJE2 317 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 C16orf96A6NNT2 1141 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 UGT2B4P06133 528 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 IRF8Q02556 426 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 MVKQ03426 396 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 BIKQ13323 160 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CAMK1Q14012 370 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TLR1Q15399 786 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CYP2A13Q16696 494 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CES4AQ5XG92 561 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF776Q68DI1 518 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GPR180Q86V85 440 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PHTF2Q8N3S3 785 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GALNT6Q8NCL4 622 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NCSTNQ92542 709 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 LRRC58Q96CX6 371 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TUBA1CQ9BQE3 449 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 AGPAT4Q9NRZ5 378 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF358Q9NW07 568 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 A6NHS1 94 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 F8W810 466 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PGRP06401 933 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 EMP3P54852 163 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CEACAM7Q14002 265 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NR6A1Q15406 480 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TAF11Q15544 211 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms