RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ITGB6P18564 788 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CSNK1EP49674 416 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CLCN7P51798 805 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SRP54P61011 504 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 LPAL2Q16609 132 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 TMEM198Q66K66 360 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 UGT3A1Q6NUS8 523 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 RPS27LQ71UM5 84 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 MYLK4Q86YV6 388 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 OR1E3Q8WZA6 343 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 FAM136AQ96C01 138 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CATSPER2Q96P56 530 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CARS2Q9HA77 564 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SARS2Q9NP81 518 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 TMEM74BQ9NUR3 256 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 STX18Q9P2W9 335 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SUFUQ9UMX1 484 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CUL9Q8IWT3 2517 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 KRT36O76013 467 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PBLDP30039 288 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 HOXD12P35452 270 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 GNPDA1P46926 289 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 ATP4BP51164 291 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CUL3Q13618 768 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 FZD2Q14332 565 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 TSNQ15631 228 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PLA2G4EQ3MJ16 856 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 C6orf163Q5TEZ5 329 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 KANK2Q63ZY3 851 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 RIPOR1Q6ZS17 1223 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 RABEPKQ7Z6M1 372 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PARGQ86W56 976 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SNX32Q86XE0 403 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 HID1Q8IV36 788 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 ZNF547Q8IVP9 402 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CLYBLQ8N0X4 340 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 FBXO39Q8N4B4 442 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SIDT2Q8NBJ9 832 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 LKAAEAR1Q8TD35 194 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PDXPQ96GD0 296 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SCARF2Q96GP6 870 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PPP1R36Q96LQ0 422 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 CCM2Q9BSQ5 444 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 SPATS2LQ9NUQ6 558 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 RNF112Q9ULX5 631 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PRPF19Q9UMS4 504 aaKnown RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 DHRS7Q9Y394 339 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 GPSM3Q9Y4H4 160 aa14.55□□□□□ -0.08
CAPN3-207ENST00000397200 DNMT3AQ9Y6K1 912 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-207ENST00000397200 NPEPPSL1A6NEC2 478 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 CDC7O00311 574 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 SKAP2O75563 359 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 POP7O75817 140 aaKnown RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 SIX3O95343 332 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 FUCA1P04066 466 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 GSTM1P09488 218 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 CD1EP15812 388 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 MTTPP55157 894 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 NXPH1P58417 271 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 IL2P60568 153 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 SH3BP2P78314 561 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 GSTM4Q03013 218 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 EIF2B5Q13144 721 aaKnown RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 SQLEQ14534 574 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 RCN1Q15293 331 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 PFKFB4Q16877 469 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 ALG11Q2TAA5 492 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 PYCR3Q53H96 274 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 PEAR1Q5VY43 1037 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 LARP4Q71RC2 724 aaKnown RBP eCLIP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 RD3Q7Z3Z2 195 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 PRSS33Q8NF86 280 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 ZNF483Q8TF39 744 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 ELMO1Q92556 727 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 LOXL4Q96JB6 756 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 LINC00615Q96LM1 132 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 OR2M4Q96R27 311 aa14.54□□□□□ -0.08
CAPN3-207ENST00000397200 PCYT1BQ9Y5K3 369 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-207ENST00000397200 LOC100653049A0A140TA62 436 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 A0A1B0GVT2 93 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 SUPT3HB4E1H0 165 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 DLL1O00548 723 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 KPNA5O15131 536 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 SUPT3HO75486 399 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 KRT34O76011 436 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 RASGRP1O95267 797 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 TNFP01375 233 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 GFAPP14136 432 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 VCLP18206 1134 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 BLKP51451 505 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 TCF15Q12870 199 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CDC16Q13042 620 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 LCP2Q13094 533 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CYLC2Q14093 348 aaPredicted RBP14.53□□□□□ -0.08
CAPN3-207ENST00000397200 BOP1Q14137 746 aaKnown RBP14.53□□□□□ -0.08
CAPN3-207ENST00000397200 DUOXA1Q1HG43 343 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 TTLL9Q3SXZ7 439 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms