RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 BPIFB1Q8TDL5 484 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF431Q8TF32 576 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SLC13A3Q8WWT9 602 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CPT1BQ92523 772 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 TBX5Q99593 518 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 RDH8Q9NYR8 311 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 IDSP22304 550 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SLC13A2Q13183 592 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CHIT1Q13231 466 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 RNF38Q9H0F5 515 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 TSPAN1O60635 241 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CHRM5P08912 532 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 DNASE1L3Q13609 305 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 KLHL6Q8WZ60 621 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 TMED9Q9BVK6 235 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 NUSAP1Q9BXS6 441 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SMURF1Q9HCE7 757 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 RUVBL1Q9Y265 456 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 ISPDA4D126 451 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ERP29P30040 261 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 GANABQ14697 944 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MON1BQ7L1V2 547 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF676Q8N7Q3 588 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 FAM110BQ8TC76 370 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 THUMPD1Q9NXG2 353 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 B3GALT2O43825 422 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MSCO60682 206 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CORO1AP31146 461 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 TPRG1LQ5T0D9 272 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SSX6Q7RTT6 188 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 DQX1Q8TE96 717 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 EIF2B4Q9UI10 523 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF878C9JN71 531 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 RP2O75695 350 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CDK14O94921 469 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 RAB36O95755 333 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 GOT2P00505 430 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 GSTT2P0CG29 244 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SLC10A7Q0GE19 358 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 DPY19L1Q2PZI1 675 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SLC22A16Q86VW1 577 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 WASF2Q9Y6W5 498 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 EI24O14681 340 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 BMP6P22004 513 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 IL17AQ16552 155 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SPIN3Q5JUX0 258 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 HAGHLQ6PII5 290 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CPA6Q8N4T0 437 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 GAL3ST4Q96RP7 486 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ITPAQ9BY32 194 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 YTHDF1Q9BYJ9 559 aaKnown RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 POFUT2Q9Y2G5 429 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ILVBLA1L0T0 632 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 ANXA8P13928 327 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 GNAZP19086 355 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SAMD14Q8IZD0 417 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CPNE2Q96FN4 548 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 PCDHGA11Q9Y5H2 935 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 OR6C75A6NL08 312 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 NMBRP28336 390 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MPIP34949 423 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 PSMD8P48556 350 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
COL4A3-202ENST00000396578 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 TIGD4Q8IY51 512 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SLC44A3Q8N4M1 653 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 AZIN2Q96A70 460 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 CREB3L1Q96BA8 519 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 S100PBPQ96BU1 408 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 PCDHGB6Q9Y5F9 930 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
COL4A3-202ENST00000396578 C8BP07358 591 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 WDR18Q9BV38 432 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 B3GNT5Q9BYG0 378 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 NOP16Q9Y3C1 178 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 HEBP2Q9Y5Z4 205 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 OR4F21O95013 312 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 TCEA1P23193 301 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ATP5A1P25705 553 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ADRA1BP35368 520 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 GRM5P41594 1212 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 RPP38P78345 283 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ZBTB8BQ8NAP8 495 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 PROKR2Q8NFJ6 384 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms