RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 OR2A14Q96R47 310 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A7Q9HAW7 530 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A10Q9HAW8 530 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A8Q9HAW9 530 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 NLRC4Q9NPP4 1024 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SMOXQ9NWM0 555 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 OR5H15A6NDH6 313 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 ZNHIT1O43257 154 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 C8BP07358 591 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 CELA2AP08217 269 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 ACPPP15309 386 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 UGT2B7P16662 529 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 BCL7AQ4VC05 210 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 AMIGO1Q86WK6 493 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 KRTAP1-3Q8IUG1 177 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 LILRB4Q8NHJ6 448 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 C8orf44Q96CB5 159 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 OR52A5Q9H2C5 316 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 ASB1Q9Y576 335 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 HIVEP2P31629 2446 aa13.08□□□□□ -0.32
VCPKMT-201ENST00000395859 DSCR3O14972 297 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 INHBBP09529 407 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 ALAS2P22557 587 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 ARSEP51690 589 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 CLEC9AQ6UXN8 241 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 NDUFAF7Q7L592 441 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 AMER2Q8N7J2 671 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 CCDC110Q8TBZ0 833 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 NAT14Q8WUY8 206 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 HSPH1Q92598 858 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 DLG3Q92796 817 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 CCM2Q9BSQ5 444 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 XKR8Q9H6D3 395 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 EURLQ9NYK6 297 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 IL17CQ9P0M4 197 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 PLCL2Q9UPR0 1127 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 ICKQ9UPZ9 632 aa13.07□□□□□ -0.32
VCPKMT-201ENST00000395859 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 MAP2K7O14733 419 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 CD48P09326 243 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 TPBGLP0DKB5 382 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 PYGMP11217 842 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 PIM1P11309 404 aaPredicted RBP13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 HOXC12P31275 282 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 ARSFP54793 590 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 KLC1Q07866 573 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 OLIG2Q13516 323 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 SLC14A2Q15849 920 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 STX1AQ16623 288 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 LONRF2Q1L5Z9 754 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 HSP90AA4PQ58FG1 418 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 FAM182AQ5T1J6 154 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 C3P1Q6ZMU1 363 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 RIPOR1Q6ZS17 1223 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 NUDT8Q8WV74 236 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 HDAC10Q969S8 669 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 UCK2Q9BZX2 261 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 SPHK1Q9NYA1 384 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 COQ3Q9NZJ6 369 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 ADAM21Q9UKJ8 722 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 MKL2Q9ULH7 1088 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 PLEKHA6Q9Y2H5 1048 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 HRH3Q9Y5N1 445 aa13.06□□□□□ -0.32
VCPKMT-201ENST00000395859 IGLV3-12A0A075B6K2 115 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 A0A0J9YY10 115 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 ASNA1O43681 348 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 ZWINTO95229 277 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 POLBP06746 335 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 ITGAMP11215 1152 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SPAM1P38567 509 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 NSG1P42857 185 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms