RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PPIP5K2O43314 1243 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 HTATSF1O43719 755 aaKnown RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 PRAF2O60831 178 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 RTN2O75298 545 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 GSRP00390 522 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CRYABP02511 175 aaKnown RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CTAGE8P0CG41 777 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 THEGLP0DJG4 465 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 SPP1P10451 314 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 SAGP10523 405 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ITIH1P19827 911 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 FBLP22087 321 aaKnown RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ATP6V1E1P36543 226 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CASP3P42574 277 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 THOP1P52888 689 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 DMPKQ09013 629 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 DLG1Q12959 904 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 C2orf76Q3KRA6 126 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 GLIPR1L2Q4G1C9 344 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 LACTB2Q53H82 288 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 LRRC73Q5JTD7 316 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 SPDYCQ5MJ68 293 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 STXBP5Q5T5C0 1151 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 NDUFAF5Q5TEU4 345 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CASC1Q6TDU7 716 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 COMMD2Q86X83 199 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ADHFE1Q8IWW8 467 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CTAGE4Q8IX94 777 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 DNAJC10Q8IXB1 793 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF441Q8N8Z8 693 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 B4GALNT2Q8NHY0 566 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 OLIG1Q8TAK6 271 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CDHR1Q96JP9 859 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CCDC43Q96MW1 224 aaKnown RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 HNRNPABQ99729 332 aaKnown RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 KLHL1Q9NR64 748 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF701Q9NV72 531 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 ACAD8Q9UKU7 415 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 WDR83OSQ9Y284 106 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMED3Q9Y3Q3 217 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 A0A0A6YYC8 382 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 A0A0G2JNG1 304 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 A0A0G2JPF8 293 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 MED19A0JLT2 244 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 C15orf62A8K5M9 175 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PRR32B1ATL7 298 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 HNRNPCL3B7ZW38 293 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 I3L1I5 382 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 KERAO60938 352 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 ATP6AP2O75787 350 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PGLSO95336 258 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 TFAP2AP05549 437 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 H1F0P07305 194 aaKnown RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 HNRNPCL4P0DMR1 293 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 GNL1P36915 607 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 USP8P40818 1118 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 KHKP50053 298 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PDLIM4P50479 330 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PLCD1P51178 756 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 MFAP3P55082 362 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 SNU13P55769 128 aaKnown RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 BPIFB3P59826 476 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 ST8SIA6P61647 398 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 RPA4Q13156 261 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 VEZF1Q14119 521 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 KIR2DS5Q14953 304 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 HFEQ30201 348 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 FAM171BQ6P995 826 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PODNL1Q6PEZ8 512 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PRSS55Q6UWB4 352 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 KCTD9Q7L273 389 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 NRARPQ7Z6K4 114 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 THAP8Q8NA92 274 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 CENPTQ96BT3 561 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF778Q96MU6 729 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF48Q96MX3 618 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 RALYQ9UKM9 306 aaKnown RBP4.72□□□□□ -1.65
HMGB1P10-201ENST00000395823 CASTOR2A6NHX0 329 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 C4orf47A7E2U8 309 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 GAPDHSO14556 408 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 PLGP00747 810 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 HMOX1P09601 288 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 UROSP10746 265 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 STMN1P16949 149 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CKMT2P17540 419 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 HLA-DPA1P20036 260 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 AHRP35869 848 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 FRKP42685 505 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 NME5P56597 212 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 STX1BP61266 288 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 CX3CL1P78423 397 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 ZBTB17Q13105 803 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 MFAP5Q13361 173 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 HLFQ16534 295 aa4.71□□□□□ -1.66
HMGB1P10-201ENST00000395823 PTGISQ16647 500 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms