RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 LONRF1Q17RB8 773 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 TMTC4Q5T4D3 741 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 IZUMO3Q5VZ72 239 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF470Q6ECI4 717 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 HIBCHQ6NVY1 386 aaPredicted RBP11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 OTOAQ7RTW8 1153 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 DCUN1D3Q8IWE4 304 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 KLHL7Q8IXQ5 586 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 UNC5BQ8IZJ1 945 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 SLC38A9Q8NBW4 561 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 HMGCLL1Q8TB92 370 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 STAMBPL1Q96FJ0 436 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 ELMO2Q96JJ3 720 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 LRFN5Q96NI6 719 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 SLC30A3Q99726 388 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 WDR83Q9BRX9 315 aaKnown RBP11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 NAT9Q9BTE0 207 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 EFHD1Q9BUP0 239 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 AKIRIN1Q9H9L7 192 aaPredicted RBP11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM60AQ9NP50 221 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 FBXO5Q9UKT4 447 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 PLAGL1Q9UM63 463 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 TDRKHQ9Y2W6 561 aaKnown RBP11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 PCDHGA6Q9Y5G7 932 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 NFS1Q9Y697 457 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 CNTRLQ7Z7A1 2325 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 SMAPO00193 183 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 TTI1O43156 1089 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 BANF1O75531 89 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 SEC31AO94979 1220 aaKnown RBP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 TTC4O95801 387 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 RECKO95980 971 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 MT-ND3P03897 115 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 RPN2P04844 631 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 PGAM1P18669 254 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CD9P21926 228 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 SLC1A2P43004 574 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 PAFAH1B1P43034 410 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 ARL4DP49703 201 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 ETF1P62495 437 aaKnown RBP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CYP4F2P78329 520 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 TIAL1Q01085 375 aaKnown RBP eCLIP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 DR1Q01658 176 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 DHX9Q08211 1270 aaKnown RBP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CRYMQ14894 314 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 TBR1Q16650 682 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 SLC5A12Q1EHB4 618 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 ACSBG2Q5FVE4 666 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 STEAP4Q687X5 459 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CDHR3Q6ZTQ4 885 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CNTN4Q8IWV2 1026 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 OTUD6BQ8N6M0 293 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 EXD3Q8N9H8 876 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZSCAN1Q8NBB4 408 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 OR2L8Q8NGY9 312 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 OR1L3Q8NH93 324 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CALML6Q8TD86 181 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 RAD51AP1Q96B01 352 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 GPN2Q9H9Y4 310 aaPredicted RBP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 LHX9Q9NQ69 397 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 ENAMQ9NRM1 1142 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 C20orf96Q9NUD7 363 aaPredicted RBP11□□□□□ -0.65
IGHV4-28-201ENST00000390612 LNPEPQ9UIQ6 1025 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 CROTQ9UKG9 612 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 PADI1Q9ULC6 663 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 MAD1L1Q9Y6D9 718 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 TEX264Q9Y6I9 313 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 DOCK10Q96BY6 2186 aa11□□□□□ -0.65
IGHV4-28-201ENST00000390612 A0A0J9YY10 115 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF891A8MT65 544 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 RASGRF2O14827 1237 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 NKX2-8O15522 239 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 HCRTR1O43613 425 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 KDM1AO60341 852 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 HAUS5O94927 633 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 NTRK1P04629 796 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 F7P08709 466 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 ERGP11308 486 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 GABRB3P28472 473 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 RORAP35398 523 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 GPS2Q13227 327 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 THOC5Q13769 683 aaKnown RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 FRG1Q14331 258 aaKnown RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 CCSMST1Q4G0I0 132 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 HSP90AA5PQ58FG0 334 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 SPANXN3Q5MJ09 141 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 CNSTQ6PJW8 725 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 CYHR1Q6ZMK1 362 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 NEK10Q6ZWH5 1172 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 GALNT7Q86SF2 657 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 TRIM73Q86UV7 250 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 DNAJC22Q8N4W6 341 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZBTB2Q8N680 514 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 C19orf47Q8N9M1 422 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms