RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TREML1Q86YW5 311 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RIT1Q92963 219 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 HSFY1Q96LI6 401 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 DPAGT1Q9H3H5 408 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RGCCQ9H4X1 137 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RAB21Q9UL25 225 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CLUHO75153 1309 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 A0A0G2JN53 185 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NOTOA8MTQ0 251 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 H0YJX3 145 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 H3BNX3 289 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CXCR6O00574 342 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GLUD1P00367 558 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 FESP07332 822 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ENTPD1P49961 510 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SP2Q02086 613 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ECH1Q13011 328 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ADAM15Q13444 863 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GRM3Q14832 879 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 OTUB2Q96DC9 234 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 LIN37Q96GY3 246 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 HSPA12BQ96MM6 686 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 KCTD7Q96MP8 289 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CFAP74Q9C0B2 1584 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MUC13Q9H3R2 512 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SQORQ9Y6N5 450 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ZNF99A8MXY4 864 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 H0YGN5 161 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 H7C2Y5 167 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TGDSO95455 350 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SFTPBP07988 381 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SMIM10L2AP0DMW4 78 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SMIM10L2BP0DMW5 78 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ALPPL2P10696 532 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GNB3P16520 340 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CD36P16671 472 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GLP1RP43220 463 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GNG2P59768 71 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CHIT1Q13231 466 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TRIM28Q13263 835 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 KLF1Q13351 362 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 ZNF267Q14586 743 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 PLEKHG6Q3KR16 790 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CRB2Q5IJ48 1285 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 DDX4Q9NQI0 724 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 C14orf105Q9NVL8 296 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 DEC1Q9P2X7 70 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CLCA3PQ9Y6N3 262 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CCDC85CA6NKD9 419 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CORO1AP31146 461 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 OR1D2P34982 312 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 UGT1A3P35503 534 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 RFX5P48382 616 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 CDH11P55287 796 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PSMA6P60900 246 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 MPP1Q00013 466 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 UGT8Q16880 541 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SVOPLQ8N434 492 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ZNF527Q8NB42 609 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SPATA22Q8NHS9 363 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CDCA5Q96FF9 252 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 P2RY11Q96G91 374 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 B3GAT2Q9NPZ5 323 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TRIM36Q9NQ86 728 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PNPLA6Q8IY17 1366 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 hCG_1818297A0A087WSY0 165 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NPIPA5E9PKD4 350 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TSHRP16473 764 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CD52P31358 61 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TNFSF9P41273 254 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MARCKSL1P49006 195 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PPP4CP60510 307 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 E2F1Q01094 437 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 IQCCQ4KMZ1 466 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 DNAJB7Q7Z6W7 309 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 SNIP1Q8TAD8 396 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 EPS8L1Q8TE68 723 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GAS2L1Q99501 681 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 EIF5A2Q9GZV4 153 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 SLC39A1Q9NY26 324 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NPIPA1Q9UND3 350 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PCDHGA6Q9Y5G7 932 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TTC37Q6PGP7 1564 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 DDTLA6NHG4 134 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 ACOX3O15254 700 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ENTPD6O75354 484 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ERBB2P04626 1255 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 COL6A2P12110 1019 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CFL1P23528 166 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 CRHR1P34998 444 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CLCN4P51793 760 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 RPL7AP62424 266 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 CACNG1Q06432 222 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 HYAL2Q12891 473 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PPM1JQ5JR12 505 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 RBM15BQ8NDT2 890 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 AUTS2Q8WXX7 1259 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ART4Q93070 314 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PCDHB18PQ96TA0 734 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 P2RX7Q99572 595 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms