RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SLC22A18Q96BI1 424 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 SLC12A9Q9BXP2 914 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 XKR8Q9H6D3 395 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 POMT2Q9UKY4 750 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.35
CKAP2-202ENST00000378034 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.35
CKAP2-202ENST00000378034 PIPSLA2A3N6 862 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF839A8K0R7 811 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 PLD2O14939 933 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 FAM155BO75949 473 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 INHBAP08476 426 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 CHRM5P08912 532 aaPredicted RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 CYP2A7P20853 494 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 MPSTP25325 297 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 SERPINB9P50453 376 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 C16orf72Q14CZ0 275 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 SNAP47Q5SQN1 464 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 UBAP2Q5T6F2 1119 aaKnown RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 CACHD1Q5VU97 1274 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 ANKS6Q68DC2 871 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 UBE2R2Q712K3 238 aaPredicted RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 TAOK1Q7L7X3 1001 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 CEP97Q8IW35 865 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 GSPT2Q8IYD1 628 aaKnown RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 MCOLN3Q8TDD5 553 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.36
CKAP2-202ENST00000378034 PARVBQ9HBI1 364 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 GPAMQ9HCL2 828 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 C1GALT1Q9NS00 363 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 FETUBQ9UGM5 382 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 ZNF180Q9UJW8 692 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 SATB2Q9UPW6 733 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 LOXL2Q9Y4K0 774 aa12.83□□□□□ -0.36
CKAP2-202ENST00000378034 GSAPA4D1B5 854 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 RASSF9O75901 435 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 DXOO77932 396 aaKnown RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 FKBP9O95302 570 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 WISP3O95389 354 aaPredicted RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 ERGP11308 486 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 CNTFP26441 200 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 CRABP2P29373 138 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 PRDX3P30048 256 aaKnown RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 MSH2P43246 934 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 KPNA2P52292 529 aaKnown RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 RAB10P61026 200 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 VSNL1P62760 191 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 CYP2A13Q16696 494 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 C3orf38Q5JPI3 329 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 TMEM207Q6UWW9 146 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 FAM92BQ6ZTR7 304 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 RCBTB1Q8NDN9 531 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 GATA6Q92908 595 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 B3GNT4Q9C0J1 378 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 ACTR10Q9NZ32 417 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 KLHL3Q9UH77 587 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 PLAGL1Q9UM63 463 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 NOVA2Q9UNW9 492 aaKnown RBP12.82□□□□□ -0.36
CKAP2-202ENST00000378034 NCOR2Q9Y618 2525 aa12.82□□□□□ -0.36
CKAP2-202ENST00000378034 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 A8MU76 341 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 B4E171 279 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 TSPAN7P41732 249 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 GABREP78334 506 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 UAP1Q16222 522 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 ERCC6LQ2NKX8 1250 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CCSMST1Q4G0I0 132 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PAFAH2Q99487 392 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CCDC77Q9BR77 488 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 TRIM54Q9BYV2 358 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PITPNM3Q9BZ71 974 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CAB39LQ9H9S4 337 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 A0A1W2PNU3 283 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 KIF1CO43896 1103 aaKnown RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 KRT38O76015 456 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 HIST1H2AGP0C0S8 130 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 JMJD7P0C870 316 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 NELFEP18615 380 aaKnown RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 HIST1H2ADP20671 130 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 RBMS1P29558 406 aaKnown RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 SLC26A3P40879 764 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 AP1S2P56377 157 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PPP1CAP62136 330 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 SLC29A2Q14542 456 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 SLC5A12Q1EHB4 618 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 LGSNQ5TDP6 509 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 EMBQ6PCB8 327 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 SPESP1Q6UW49 350 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 LINC01555Q8NAE3 123 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 DENND1AQ8TEH3 1009 aa12.81□□□□□ -0.36
CKAP2-202ENST00000378034 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 PRR11Q96HE9 360 aaPredicted RBP12.81□□□□□ -0.36
CKAP2-202ENST00000378034 SLC41A2Q96JW4 573 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms