RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	GAPDHS	O14556	408 aa	Predicted RBP	11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	RAD51B	O15315	384 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	PEX1	O43933	1283 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	CIB2	O75838	187 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	IMPDH1	P20839	514 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	GTF2H3	Q13889	308 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	ADGRE1	Q14246	886 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	GATAD2A	Q86YP4	633 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM151A	Q8N4L1	468 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	LINC00469	Q8N7U9	141 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	OR14C36	Q8NHC7	312 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	SLC26A7	Q8TE54	656 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	CCDC124	Q96CT7	223 aa	Known RBP	11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	NUS1	Q96E22	293 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	ZSCAN5A	Q9BUG6	496 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	NDRG2	Q9UN36	371 aa	Known RBP	11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	PIAS3	Q9Y6X2	628 aa		11.44	□□□□□ -0.58
LMO7-204	ENST00000377499	GSC2	O15499	205 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	MAGEC1	O60732	1142 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	SEMA3D	O95025	777 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PCCB	P05166	539 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	C6	P13671	934 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ITGB7	P26010	798 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	MAT2A	P31153	395 aa	Known RBP	11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	SERPINB5	P36952	375 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	AP2B1	P63010	937 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ABR	Q12979	859 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	GAB4	Q2WGN9	574 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	SPDYA	Q5MJ70	313 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	CRTC3	Q6UUV7	619 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ADAMTSL2	Q86TH1	951 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	UQCC2	Q9BRT2	126 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	THTPA	Q9BU02	230 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	RAD18	Q9NS91	495 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ARL15	Q9NXU5	204 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	KCTD5	Q9NXV2	234 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	EIF2B4	Q9UI10	523 aa	Known RBP	11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	MED16	Q9Y2X0	877 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	BPTF	Q12830	3046 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ARHGAP33	O14559	1287 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	MMP12	P39900	470 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	HERVK_113	P63132	956 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PLA2G4E	Q3MJ16	856 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM220	Q6QAJ8	160 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	SCIMP	Q6UWF3	145 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ATG14	Q6ZNE5	492 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	DPPA4	Q7L190	304 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	FUBP1	Q96AE4	644 aa	Known RBP	11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM159	Q96B96	161 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TMIGD2	Q96BF3	282 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TAMM41	Q96BW9	452 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	NSL1	Q96IY1	281 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	FAM129B	Q96TA1	746 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ERVK-6	Q9BXR3	956 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	P2RY12	Q9H244	342 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ARL8B	Q9NVJ2	186 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	IKZF3	Q9UKT9	509 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	DMTF1	Q9Y222	760 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TRAF6	Q9Y4K3	522 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	C2orf16	Q68DN1	1984 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	CXorf51A	A0A1B0GTR3	108 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TARM1	B6A8C7	271 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	NPHS1	O60500	1241 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	DNTT	P04053	509 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	LTBR	P36941	435 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	CLCN7	P51798	805 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PTPN5	P54829	565 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	ZNF678	Q5SXM1	525 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	UBE2U	Q5VVX9	321 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TXNDC11	Q6PKC3	985 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	AMIGO2	Q86SJ2	522 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PHYKPL	Q8IUZ5	450 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	TOR1AIP2	Q8NFQ8	470 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	MAPK15	Q8TD08	544 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	VPS35	Q96QK1	796 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	OR52B2	Q96RD2	323 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	OSBPL6	Q9BZF3	934 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	SLC6A17	Q9H1V8	727 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	OR2AG1	Q9H205	316 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	C8orf4	Q9NR00	106 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PCDHGB4	Q9UN71	923 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PCDHGB5	Q9Y5G0	923 aa		11.43	□□□□□ -0.58
LMO7-204	ENST00000377499	PRR5-ARHGAP8	B1AHC4	643 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	PPP6C	O00743	305 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	AQP9	O43315	295 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	KLF8	O95600	359 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	ABCB1	P08183	1280 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	ACADM	P11310	421 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	HOXB2	P14652	356 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	MAP4	P27816	1152 aa	Known RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	BMP8B	P34820	402 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	HSPA7	P48741	367 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TUBA4A	P68366	448 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	ARHGAP8	P85298	464 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	RPS6KA2	Q15349	733 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	CST6	Q15828	149 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms