RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SLC25A52Q3SY17 297 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ATP6AP1LQ52LC2 224 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 RAB44Q7Z6P3 723 aaPredicted RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 UBE2FQ969M7 185 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 RNF31Q96EP0 1072 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 FRMD6Q96NE9 622 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 COX16Q9P0S2 106 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 A0A096LPI6 279 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 JCHAINP01591 159 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 HLA-DMAP28067 261 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 C21orf33P30042 268 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 MATKP42679 507 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 SRP54P61011 504 aaKnown RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PLA2G4EQ3MJ16 856 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ZBTB8OSQ8IWT0 167 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TTC29Q8NA56 475 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF548Q8NEK5 533 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 MCCC1Q96RQ3 725 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TMEM209Q96SK2 561 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PTPN18Q99952 460 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TBL1YQ9BQ87 522 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 DYRK4Q9NR20 520 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TREX1Q9NSU2 369 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 VNN3Q9NY84 501 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CFL2Q9Y281 166 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 A0A075B6Q4 140 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 A0A1W2PQ09 198 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 B4DXG7 233 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CRCPO75575 148 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 B2MP61769 119 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 MGAT3Q09327 533 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ELP6Q0PNE2 266 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TARBP2Q15633 366 aaKnown RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 DDR2Q16832 855 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PFKFB4Q16877 469 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TMEM132AQ24JP5 1023 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 IER5Q5VY09 327 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CPZQ66K79 652 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 LAMTOR1Q6IAA8 161 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 DEFB106AQ8N104 65 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 NPWQ8N729 165 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 SPATA22Q8NHS9 363 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 GIMAP1Q8WWP7 306 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 DNASE1L2Q92874 299 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 GABARAPL1Q9H0R8 117 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 FAM83DQ9H4H8 585 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 MAGIXQ9H6Y5 334 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 SLC23A1Q9UHI7 598 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 KCNE2Q9Y6J6 123 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CXCR6O00574 342 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 B4GALT5O43286 388 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 WISP3O95389 354 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 SOX9P48436 509 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ERVK-8P63133 956 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 PWP1Q13610 501 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TAB1Q15750 504 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
PRPF4-201ENST00000374198 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CDYL2Q8N8U2 506 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 OR52E4Q8NGH9 312 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 OR52K2Q8NGK3 314 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 ASB15Q8WXK1 588 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 CDT1Q9H211 546 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 RNF121Q9H920 327 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 C3orf14Q9HBI5 128 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 HSPB11Q9Y547 144 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 AUP1Q9Y679 476 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 V9GYH0 126 aa12.64□□□□□ -0.39
PRPF4-201ENST00000374198 MGAMO43451 1857 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ANK1P16157 1881 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ARNTLO00327 626 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 KIAA0513O60268 411 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 PCDHGA12O60330 932 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 SCELO95171 688 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 EPHA2P29317 976 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms