RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KLQ9UEF7 1012 aa15.29■□□□□ 0.04
HDAC8-209ENST00000373589 ZFC3H1O60293 1989 aaKnown RBP15.28■□□□□ 0.04
HDAC8-209ENST00000373589 A0A1W2PQU0 124 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 BBIP1A8MTZ0 92 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 SLC28A1O00337 649 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 PDE5AO76074 875 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 SLC16A8O95907 504 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 LMNAP02545 664 aaKnown RBP15.28■□□□□ 0.04
HDAC8-209ENST00000373589 GLULP15104 373 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 ITPKAP23677 461 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 IMPA1P29218 277 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 DPP6P42658 865 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 NME5P56597 212 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 PCDH1Q08174 1060 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 RPS6KA2Q15349 733 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 NR6A1Q15406 480 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 SMU1Q2TAY7 513 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 C6orf163Q5TEZ5 329 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 HACD2Q6Y1H2 254 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 OXR1Q8N573 874 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 OR56A3Q8NH54 315 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 TSPEARQ8WU66 669 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 PPP3R2Q96LZ3 170 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 OR52A5Q9H2C5 316 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 WDR26Q9H7D7 661 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
HDAC8-209ENST00000373589 NKX1-2Q9UD57 310 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-209ENST00000373589 FZD4Q9ULV1 537 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 PRKAB1Q9Y478 270 aa15.28■□□□□ 0.04
HDAC8-209ENST00000373589 DNMT3AQ9Y6K1 912 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-209ENST00000373589 A0A1W2PPC1 479 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 GPR89AB7ZAQ6 455 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 RGS14O43566 566 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 RNGTTO60942 597 aaKnown RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 SORBS2O94875 1100 aaKnown RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 KRT6AP02538 564 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 KRT6BP04259 564 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 GPR89BP0CG08 455 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 ZFP36L2P47974 494 aaKnown RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 KRT6CP48668 564 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 RPA4Q13156 261 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 SGCGQ13326 291 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 CPSF6Q16630 551 aaKnown RBP eCLIP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 AP5B1Q2VPB7 878 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 PLA2G4EQ3MJ16 856 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 MMEL1Q495T6 779 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 C1orf146Q5VVC0 180 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 C8orf82Q6P1X6 216 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 BLOC1S3Q6QNY0 202 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 BNC2Q6ZN30 1099 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 USP30Q70CQ3 517 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 LRRTM4Q86VH4 590 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 AMZ2Q86W34 360 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 THOC6Q86W42 341 aaKnown RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 HORMAD1Q86X24 394 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 MYLK4Q86YV6 388 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 HPS6Q86YV9 775 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 KLK6Q92876 244 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 SIPA1Q96FS4 1042 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 CDRT15Q96T59 188 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 C1orf50Q9BV19 199 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 SLC17A9Q9BYT1 436 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 OSBPL6Q9BZF3 934 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 ZDHHC5Q9C0B5 715 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 DCLRE1BQ9H816 532 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 UBE2ZQ9H832 354 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 PREBQ9HCU5 417 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 ZIM2Q9NZV7 527 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 SLC23A2Q9UGH3 650 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 ZNHIT2Q9UHR6 403 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 ZNF490Q9ULM2 529 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-209ENST00000373589 OR1A2Q9Y585 309 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 PCDHGA7Q9Y5G6 932 aa15.27■□□□□ 0.04
HDAC8-209ENST00000373589 MRASO14807 208 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 UGDHO60701 494 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 ASGR2P07307 311 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 CAPN3P20807 821 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 NAE1Q13564 534 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 CCINQ13939 588 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 RFTN2Q52LD8 501 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-209ENST00000373589 PIGGQ5H8A4 983 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 RETREG3Q86VR2 466 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 RGL4Q8IZJ4 473 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 MRGPRX1Q96LB2 322 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 TEX37Q96LM6 180 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 OR4K3Q96R72 315 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 GAS2L1Q99501 681 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-209ENST00000373589 SNX6Q9UNH7 406 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 POMPQ9Y244 141 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 L3MBTL1Q9Y468 752 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 SERTM1A2A2V5 107 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 NR5A2O00482 541 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 NARSO43776 548 aaKnown RBP15.26■□□□□ 0.03
HDAC8-209ENST00000373589 SLC22A3O75751 556 aa15.26■□□□□ 0.03
HDAC8-209ENST00000373589 PSMG1O95456 288 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms