RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CD2P06729 351 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 NAT1P18440 290 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 IGFBP5P24593 272 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SCNN1AP37088 669 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 LAPTM5Q13571 262 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 KCTD19Q17RG1 926 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GDPD4Q6W3E5 623 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 LNX2Q8N448 690 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPIP06744 558 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 POLR2JP52435 117 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 GALK2Q01415 458 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 CENPNQ96H22 339 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
RAPGEF1-201ENST00000372189 MTMR11A4FU01 709 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 DNAJA2O60884 412 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 RAB15P59190 212 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 RHEBQ15382 184 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 PCYT2Q99447 389 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 BRD7Q9NPI1 651 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.31
RAPGEF1-201ENST00000372189 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 ILVBLA1L0T0 632 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 FAM149AA5PLN7 773 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 I3L521 148 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SERPINB7O75635 380 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 GALTP07902 379 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 MTAPQ13126 283 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 ETFRF1Q6IPR1 90 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 GALNT15Q8N3T1 639 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CYB5D2Q8WUJ1 264 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 TCRBV7S2A1N4TA0A589 114 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC25A12O75746 678 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 AHSA1O95433 338 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 HTRA3P83110 453 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 FBXL18Q96ME1 805 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF607Q96SK3 696 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 EBF3Q9H4W6 596 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CXorf21Q9HAI6 301 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 C3orf14Q9HBI5 128 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CHRNA1P02708 482 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC6A2P23975 617 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 C2orf76Q3KRA6 126 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRRC73Q5JTD7 316 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 IRF7Q92985 503 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 TIMM29Q9BSF4 260 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 OSBPL2Q9H1P3 480 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CCDC177Q9NQR7 707 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 PHF11Q9UIL8 331 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 FKBPLQ9UIM3 349 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 WWP2O00308 870 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 AQP4P55087 323 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CA9Q16790 459 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 HKDC1Q2TB90 917 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SH3PXD2AQ5TCZ1 1133 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC39A4Q6P5W5 647 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 HAGHLQ6PII5 290 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CMTR2Q8IYT2 770 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 SUV39H2Q9H5I1 410 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 WNT6Q9Y6F9 365 aa13.08□□□□□ -0.32
RAPGEF1-201ENST00000372189 CASKO14936 926 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRATO95237 230 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 CYBAP13498 195 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SDC2P34741 201 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 GNPDA1P46926 289 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 NAE1Q13564 534 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 TAF13Q15543 124 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 OLFML2AQ68BL7 652 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 LDB1Q86U70 411 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 TTYH3Q9C0H2 523 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 PGRMC2O15173 223 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 KRT33AO76009 404 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 GNAO1P09471 354 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 CDH13P55290 713 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SEMA5AQ13591 1074 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms