RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TBC1D3HP0C7X1 549 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 GPR89BP0CG08 455 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 MYCLP1P12525 358 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 CD72P21854 359 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 HNRNPH1P31943 449 aaKnown RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 NUDT2P50583 147 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 DIO3P55073 304 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 ERVK-8P63133 956 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 RPA4Q13156 261 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 KIF19Q2TAC6 998 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 C6orf136Q5SQH8 315 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 TBC1D3GQ6DHY5 549 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 TBC1D3CQ6IPX1 549 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 FAM124AQ86V42 546 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 AMZ2Q86W34 360 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 DEFB107AQ8IZN7 70 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 TBC1D3Q8IZP1 549 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 MIER2Q8N344 545 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 OR56A3Q8NH54 315 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 ASB12Q8WXK4 309 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 USP7Q93009 1102 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 HBEGFQ99075 208 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 C1QTNF7Q9BXJ2 289 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 FZD3Q9NPG1 666 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 SDR39U1Q9NRG7 319 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 TM7SF3Q9NS93 570 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 FARSBQ9NSD9 589 aaKnown RBP17.06■□□□□ 0.32
SSBP3-203ENST00000371319 CCDC167Q9P0B6 97 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 KLQ9UEF7 1012 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 BAIAP2L1Q9UHR4 511 aa17.06■□□□□ 0.32
SSBP3-203ENST00000371319 NUMA1Q14980 2115 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 TCRBV21S2A2A0A5A6 115 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 FBP2O00757 339 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 LSM1O15116 133 aaKnown RBP17.05■□□□□ 0.32
SSBP3-203ENST00000371319 FUCA1P04066 466 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 SNRPB2P08579 225 aaKnown RBP17.05■□□□□ 0.32
SSBP3-203ENST00000371319 IDO1P14902 403 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 GABRG2P18507 467 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 MAT2AP31153 395 aaKnown RBP17.05■□□□□ 0.32
SSBP3-203ENST00000371319 TDGQ13569 410 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 PGM2L1Q6PCE3 622 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 TRIM46Q7Z4K8 759 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 THOC6Q86W42 341 aaKnown RBP17.05■□□□□ 0.32
SSBP3-203ENST00000371319 DSELQ8IZU8 1212 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 KYQ8NBH2 561 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 NPAS2Q99743 824 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 BRINP2Q9C0B6 783 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 ACTR8Q9H981 624 aa17.05■□□□□ 0.32
SSBP3-203ENST00000371319 INTS7Q9NVH2 962 aaKnown RBP17.05■□□□□ 0.32
SSBP3-203ENST00000371319 SLC28A1O00337 649 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 KMOO15229 486 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 SLC16A8O95907 504 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 ACADMP11310 421 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 NME5P56597 212 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 NAE1Q13564 534 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 ATP6AP1LQ52LC2 224 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 REP15Q6BDI9 236 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 C16orf89Q6UX73 402 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 UNC5DQ6UXZ4 953 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 WDR60Q8WVS4 1066 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 HLA-CQ95604 372 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 OR4K3Q96R72 315 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 CDX2Q99626 313 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-203ENST00000371319 APOOQ9BUR5 198 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 EFCAB1Q9HAE3 211 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 SLC7A8Q9UHI5 535 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 ZNHIT2Q9UHR6 403 aa17.04■□□□□ 0.32
SSBP3-203ENST00000371319 ZNF490Q9ULM2 529 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-203ENST00000371319 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
SSBP3-203ENST00000371319 ULK1O75385 1050 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 CEACAM5P06731 702 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 EMX2Q04743 252 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 PCDH1Q08174 1060 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 TBL3Q12788 808 aaKnown RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SFSWAPQ12872 951 aaKnown RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 GRIK2Q13002 908 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 STX5Q13190 355 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 KPNB1Q14974 876 aaKnown RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 NR6A1Q15406 480 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 MLF2Q15773 248 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SNCBQ16143 134 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 LEXMQ3ZCV2 418 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 PDCD4Q53EL6 469 aaKnown RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 METRNLQ641Q3 311 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 MYLK4Q86YV6 388 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 HOMEZQ8IX15 550 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 PPFIBP2Q8ND30 876 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SPDYE1Q8NFV5 336 aaPredicted RBP17.03■□□□□ 0.32
SSBP3-203ENST00000371319 OR9A1PQ8NGU1 263 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SLC45A3Q96JT2 553 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SLC25A23Q9BV35 468 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SLC17A4Q9Y2C5 497 aa17.03■□□□□ 0.32
SSBP3-203ENST00000371319 SLC31A1O15431 190 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 RGS14O43566 566 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 ACSL1P33121 698 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 ZFP36L2P47974 494 aaKnown RBP17.02■□□□□ 0.32
SSBP3-203ENST00000371319 TPMTP51580 245 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms