RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 OR4F6Q8NGB9 312 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 ZNF420Q8TAQ5 688 aaPredicted RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 RHBDF1Q96CC6 855 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 RSPRY1Q96DX4 576 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 AIG1Q9NVV5 245 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 TMEM181Q9P2C4 612 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 CD300AQ9UGN4 299 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 ALPK3Q96L96 1907 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 S100BP04271 92 aaPredicted RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 CYP17A1P05093 508 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 DCKP27707 260 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 RECQLP46063 649 aaPredicted RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 ZFP36L2P47974 494 aaKnown RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 MRPL19P49406 292 aaKnown RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 HTR6P50406 440 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 ZDHHC20Q5W0Z9 365 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 HSD11B1LQ7Z5J1 315 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 SPATA19Q7Z5L4 167 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 DNAJC5GQ8N7S2 189 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 SCAMP4Q969E2 229 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 ASB9Q96DX5 294 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 NPLQ9BXD5 320 aaPredicted RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 PCDHAC1Q9H158 963 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 IPPKQ9H8X2 491 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 RIC8BQ9NVN3 520 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 SUCOQ9UBS9 1254 aaKnown RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
GPC3-201ENST00000370818 CROCCQ5TZA2 2017 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 BBIP1A8MTZ0 92 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 ZNF197O14709 1029 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 CISD3P0C7P0 127 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 TRIM25Q14258 630 aaKnown RBP12.52□□□□□ -0.4
GPC3-201ENST00000370818 OXA1LQ15070 435 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 CRY1Q16526 586 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 TTLL9Q3SXZ7 439 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 C6orf136Q5SQH8 315 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 MBOAT1Q6ZNC8 495 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 METTL6Q8TCB7 284 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 ROPN1LQ96C74 230 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 HBEGFQ99075 208 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 KCTD5Q9NXV2 234 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 KLHL42Q9P2K6 505 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 AP4S1Q9Y587 144 aa12.52□□□□□ -0.4
GPC3-201ENST00000370818 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 FXYD1O00168 92 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 KATNA1O75449 491 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 RB1P06400 928 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 TIMP2P16035 220 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 ZNF30P17039 623 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 AOAHP28039 575 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 YBX1P67809 324 aaKnown RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 ARHGEF7Q14155 803 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.417e-8■■■□□ 15.2
GPC3-201ENST00000370818 TRIM16LQ309B1 348 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 SULT1C3Q6IMI6 304 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 ADGRD2Q7Z7M1 963 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 CADM3Q8N126 398 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 SFRP1Q8N474 314 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 ZNF366Q8N895 744 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 FAM47BQ8NA70 645 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 ULK4Q96C45 1275 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 CCDC138Q96M89 665 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 EGFL8Q99944 293 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 CD244Q9BZW8 370 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 NAA50Q9GZZ1 169 aaKnown RBP12.52□□□□□ -0.41
GPC3-201ENST00000370818 RDH14Q9HBH5 336 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
GPC3-201ENST00000370818 PLXNB3Q9ULL4 1909 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 PIKFYVEQ9Y2I7 2098 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 KDM1AO60341 852 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 MTX2O75431 263 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 OTCP00480 354 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 CBSLP0DN79 551 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 JAK1P23458 1154 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 VIPR1P32241 457 aa12.51□□□□□ -0.41
GPC3-201ENST00000370818 CBSP35520 551 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms