RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 IL6P05231 212 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ETV6P41212 452 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 NKX2-5P52952 324 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MLLT6P55198 1093 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 COPZ1P61923 177 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 TTC23LQ6PF05 361 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 RNF165Q6ZSG1 346 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 TAS2R42Q7RTR8 314 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ARRDC4Q8NCT1 418 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 IL17RDQ8NFM7 739 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 DHRS1Q96LJ7 313 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 GAD1Q99259 594 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 IL37Q9NZH6 218 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 EVLQ9UI08 416 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MKLN1Q9UL63 735 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 HS3ST4Q9Y661 456 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 TRBV5-3A0A0A0MS03 114 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 EVPLLA8MZ36 301 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 BTN3A1O00481 513 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ENPP3O14638 875 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 SEC22BO75396 215 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 CCNKO75909 580 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 SERPINF2P08697 491 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 SPNP16150 400 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ARHGDIAP52565 204 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MAD2L1Q13257 205 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 NR6A1Q15406 480 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MAPKAPK3Q16644 382 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 AP5B1Q2VPB7 878 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 TPRG1LQ5T0D9 272 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ZNF544Q6NX49 715 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 CCBE1Q6UXH8 406 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 GPSM1Q86YR5 675 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MSRB3Q8IXL7 192 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 METTL4Q8N3J2 472 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 Q8N9G6 341 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MYLPFQ96A32 169 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 PITX2Q99697 317 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 SLC25A37Q9NYZ2 338 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 MPP6Q9NZW5 540 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 EIF2B4Q9UI10 523 aaKnown RBP17.05■□□□□ 0.32
CHTOP-203ENST00000368690 INVSQ9Y283 1065 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 ARL5AQ9Y689 179 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 PATJQ8NI35 1801 aa17.05■□□□□ 0.32
CHTOP-203ENST00000368690 TNFRSF10AO00220 468 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 AIREO43918 545 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 MITFO75030 526 aaPredicted RBP17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
CHTOP-203ENST00000368690 APOA1P02647 267 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 RHOQP17081 205 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 S100A5P33763 92 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 SEPHS1P49903 392 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 FBXO48Q5FWF7 155 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
CHTOP-203ENST00000368690 LETMD1Q6P1Q0 360 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 IL27RAQ6UWB1 636 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 CCDC103Q8IW40 242 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 HMCESQ96FZ2 354 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 RIBC2Q9H4K1 309 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 IKZF5Q9H5V7 419 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 SP110Q9HB58 689 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 ZNF221Q9UK13 617 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 ST3GAL5Q9UNP4 418 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 POLR3HQ9Y535 204 aaPredicted RBP17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PNMA8CA0A1B0GUJ8 204 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 E9PQ18 207 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 J3KR12 359 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 NDUFB5O43674 189 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 MED26O95402 600 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 TSPAN12O95859 305 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 SERPINA1P01009 418 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PSMA3P25788 255 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 KRT6CP48668 564 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 GZMMP51124 257 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PCBP2Q15366 365 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHTOP-203ENST00000368690 FAM171BQ6P995 826 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 HOMEZQ8IX15 550 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PARP16Q8N5Y8 322 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 KBTBD8Q8NFY9 601 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 OR7G1Q8NGA0 311 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 OR6F1Q8NGZ6 308 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 METTL6Q8TCB7 284 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 CDKN2AIPNLQ96HQ2 116 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 GPR21Q99679 349 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 C1orf109Q9NX04 203 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 ASIC5Q9NY37 505 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 NUDT4Q9NZJ9 180 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 PEX16Q9Y5Y5 336 aa17.04■□□□□ 0.32
CHTOP-203ENST00000368690 DOCK4Q8N1I0 1966 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 MICAL3Q7RTP6 2002 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 HOXC11O43248 304 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 CAPN1P07384 714 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 CXCR2P25025 360 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms