RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 C1orf127Q8N9H9 656 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 OR2L8Q8NGY9 312 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SPATA22Q8NHS9 363 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ROPN1LQ96C74 230 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CPNE2Q96FN4 548 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 DUSP26Q9BV47 211 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 BTBD1Q9H0C5 482 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ANGPTL1O95841 491 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CSNK2A2P19784 350 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 NR4A1P22736 598 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 TM4SF1P30408 202 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 UGT1A3P35503 534 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 RPS14P62263 151 aaKnown RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 DPY19L1Q2PZI1 675 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 STRADBQ9C0K7 418 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 CCNE2O96020 404 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 GBX2P52951 348 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 DAOAP59103 153 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 AHSA2Q719I0 299 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF627Q7L945 461 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 PROKR2Q8NFJ6 384 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 RGMAQ96B86 450 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 C8orf48Q96LL4 319 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 TMEM175Q9BSA9 504 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 TBC1D17Q9HA65 648 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 LRRC4CQ9HCJ2 640 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 C14orf105Q9NVL8 296 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDH7O60245 1069 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF3P17036 446 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 LILRA4P59901 499 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF776Q68DI1 518 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SDR16C5Q8N3Y7 309 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 OXR1Q8N573 874 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 FAM110BQ8TC76 370 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SDCBP2Q9H190 292 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 SMPD3Q9NY59 655 aaPredicted RBP15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDHB3Q9Y5E6 796 aa15.42■□□□□ 0.06
NUCKS1-201ENST00000367142 METTL21EPA6NDL7 271 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 CLCN4P51793 760 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 CASP6P55212 293 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF662Q6ZS27 426 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PGAM4Q8N0Y7 254 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 DBF4BQ8NFT6 615 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 KREMEN1Q96MU8 473 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SLC2A4RGQ9NR83 387 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 hCG_2039718K7EN88 272 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 CXCR6O00574 342 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PRKCHP24723 683 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PER3P56645 1201 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 MBLAC2Q68D91 279 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ANKRD46Q86W74 232 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 GSTCDQ8NEC7 633 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDHB18PQ96TA0 734 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 H0YJX3 145 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 GABRDO14764 452 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 GPIP06744 558 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 S100A1P23297 94 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PRDX6P30041 224 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 RAB39AQ14964 217 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ARMCX6Q7L4S7 300 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 LRRTM4Q86VH4 590 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 C12orf40Q86WS4 652 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 MMAAQ8IVH4 418 aaKnown RBP15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 KLHL6Q8WZ60 621 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 BORCS5Q969J3 196 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 LENG1Q96BZ8 264 aaPredicted RBP15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SMURF1Q9HCE7 757 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ENY2Q9NPA8 101 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 CCL22O00626 93 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 NUAK1O60285 661 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ITGA10O75578 1167 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 NMBRP28336 390 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 HSDL2Q6YN16 418 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 IRF2BP2Q7Z5L9 587 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 LNX2Q8N448 690 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 GRHL3Q8TE85 626 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 RELTQ969Z4 430 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ZSCAN5AQ9BUG6 496 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SUV39H2Q9H5I1 410 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 METTL7AQ9H8H3 244 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 S100A14Q9HCY8 104 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ZNF180Q9UJW8 692 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 TLR6Q9Y2C9 796 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 A0A1W2PRB8 838 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SLC7A4O43246 635 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SELENOVP59797 346 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 TARDBPQ13148 414 aaKnown RBP eCLIP15.41■□□□□ 0.063e-9■■■■□ 24.3
NUCKS1-201ENST00000367142 CCINQ13939 588 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 MLIPQ5VWP3 458 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 PDPRQ8NCN5 879 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 SCLYQ96I15 445 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 ITM2CQ9NQX7 267 aa15.41■□□□□ 0.06
NUCKS1-201ENST00000367142 TBX1O43435 398 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 FAM155BO75949 473 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 DRD4P21917 467 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms