RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 EI24O14681 340 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ADAMTS3O15072 1205 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 RASGRP1O95267 797 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TPGS1Q6ZTW0 290 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM161BQ8NDZ6 487 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 LYARQ9NX58 379 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TRAV6A0A075B6T7 132 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3DA0A087WVF3 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3IA0A087WXS9 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3KA0A087X1G2 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 HYKKA2RU49 373 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3FA6NER0 549 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3LB9A6J9 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBX10O75333 385 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3HP0C7X1 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 YAP1P46937 504 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CRISP1P54107 249 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CASP9P55211 416 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CDH15P55291 814 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3GQ6DHY5 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3CQ6IPX1 549 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TBC1D3Q8IZP1 549 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 KCTD15Q96SI1 283 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 FARSBQ9NSD9 589 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ITGA10O75578 1167 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 HCAR3P49019 387 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 VLDLRP98155 873 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ITPAQ9BY32 194 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ST14Q9Y5Y6 855 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 DUXAA6NLW8 204 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 RAP2AP10114 183 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ANXA3P12429 323 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 KHKP50053 298 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 CLEC6AQ6EIG7 209 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 OR10A6Q8NH74 314 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 OR10G6Q8NH81 332 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF514Q96K75 400 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 MCMBPQ9BTE3 642 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 MAF1Q9H063 256 aa12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 PTBP2Q9UKA9 531 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-201ENST00000360413 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PRKCIP41743 596 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 LIX1Q8N485 282 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TEX19Q8NA77 164 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 GLB1L3Q8NCI6 653 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 AZIN2Q96A70 460 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TSSK3Q96PN8 268 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TPST2O60704 377 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TBL1XO60907 577 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 BDNFP23560 247 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC7A1P30825 629 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TGFBIQ15582 683 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 DPY19L1Q2PZI1 675 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC35C1Q96A29 364 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RNF157Q96PX1 679 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RIMKLBQ9ULI2 386 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 SCELO95171 688 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 HSD11B1P28845 292 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 KRBOX4Q5JUW0 171 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 TMED4Q7Z7H5 227 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 STON2Q8WXE9 905 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 EPYCQ99645 322 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 IGSF9Q9P2J2 1179 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 hCG_1818297A0A087WSY0 165 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PCDHGA12O60330 932 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 CLDN9O95484 217 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ARP10275 920 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 FUT4P22083 530 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 GNPDA1P46926 289 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RPL26P61254 145 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 LRIF1Q5T3J3 769 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 ABHD13Q7L211 337 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RHOJQ9H4E5 214 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 WDR6Q9NNW5 1121 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 OR6C75A6NL08 312 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 CLDN11O75508 207 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 RGS6P49758 472 aa12.97□□□□□ -0.33
SRGAP3-201ENST00000360413 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms