RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 OXR1Q8N573 874 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 CPT1BQ92523 772 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SGCDQ92629 289 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ALG3Q92685 438 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ZNF717Q9BY31 904 aaPredicted RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 TMPRSS4Q9NRS4 437 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 C2orf71A6NGG8 1288 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 LGR5O75473 907 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SPARCP09486 303 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 FMO3P31513 532 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ZNF155Q12901 538 aaPredicted RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 DRICH1Q6PGQ1 229 aaPredicted RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 BAIAP2L2Q6UXY1 529 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 NRSN1Q8IZ57 195 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 HIST1H2AAQ96QV6 131 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 MYOCQ99972 504 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 RUVBL1Q9Y265 456 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 AK9Q5TCS8 1911 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 hCG_2039718K7EN88 272 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 TLR4O00206 839 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 GADD45AP24522 165 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ERVK-21P61565 698 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SF1Q15637 639 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 PAOXQ6QHF9 649 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 CHERPQ8IWX8 916 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 CYP2W1Q8TAV3 490 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 RIOK2Q9BVS4 552 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 CDT1Q9H211 546 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 KCNMB3Q9NPA1 279 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 TRIM36Q9NQ86 728 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 CFAP97Q9P2B7 532 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SLC27A5Q9Y2P5 690 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ABCB7O75027 752 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 INMTO95050 263 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 RAB36O95755 333 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 OR1D2P34982 312 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 MAP3K8P41279 467 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 INAVAQ3KP66 663 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ASB18Q6ZVZ8 466 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 RBM23Q86U06 439 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 ELMOD2Q8IZ81 293 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 ZNF781Q8N8C0 355 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 TESCQ96BS2 214 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 CPNE2Q96FN4 548 aaPredicted RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 MED31Q9Y3C7 131 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CYP17A1P05093 508 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 IL7P13232 177 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.397e-64■■■■■ 337.8
SMC4-202ENST00000357388 ICAM3P32942 547 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 UGT2B10P36537 528 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 XKP51811 444 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 AIMP2Q13155 320 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 SEC23BQ15437 767 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 GALNT13Q8IUC8 556 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CLIP4Q8N3C7 705 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PIWIL1Q96J94 861 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 RHPN2P1A8MT19 583 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PPM1BO75688 479 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SELPP16109 830 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CMPK1P30085 196 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 LRRC70Q7Z2Q7 622 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ADGRD2Q7Z7M1 963 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 OR2AJ1Q8NGZ0 328 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ACO2Q99798 780 aaKnown RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 SPATA9Q9BWV2 254 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 POLMQ9NP87 494 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 PADI2Q9Y2J8 665 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 SNX10Q9Y5X0 201 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 H3BSA7 217 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ZNF20P17024 532 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 RGS19P49795 217 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 FADDQ13158 208 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
SMC4-202ENST00000357388 ZACNQ401N2 412 aa12.61□□□□□ -0.39
SMC4-202ENST00000357388 CERCAMQ5T4B2 595 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms