RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 KCNC4Q03721 635 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 LGALS3BPQ08380 585 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 OVOS1Q6IE37 1185 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 DPY19L2P1Q6NXN4 242 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 TIGD4Q8IY51 512 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 UTP15Q8TED0 518 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 CAMK1GQ96NX5 476 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ATP13A2Q9NQ11 1180 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 RDH8Q9NYR8 311 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 PLOD3O60568 738 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 EPOP01588 193 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 MT-ND1P03886 318 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 SP140Q13342 867 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 CLCA4Q14CN2 919 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 CRY2Q49AN0 593 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 HECTD3Q5T447 861 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 BRINP3Q76B58 766 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 PHF21BQ96EK2 531 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ZNF599Q96NL3 588 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 SLITRK2Q9H156 845 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 LATS2Q9NRM7 1088 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 C14orf105Q9NVL8 296 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 GPATCH2LQ9NWQ4 482 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 KLHL28Q9NXS3 571 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 HCN4Q9Y3Q4 1203 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 GJA3Q9Y6H8 435 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 DLX3O60479 287 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 S100A6P06703 90 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 FGF4P08620 206 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 LCP1P13796 627 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 CXCR2P25025 360 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 DSC3Q14574 896 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 MARC1Q5VT66 337 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 INTS5Q6P9B9 1019 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 PIWIL3Q7Z3Z3 882 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 LGALS12Q96DT0 336 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 DUSP16Q9BY84 665 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 FAM126AQ9BYI3 521 aaPredicted RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 PIH1D1Q9NWS0 290 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 AFF4Q9UHB7 1163 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 TRPS1Q9UHF7 1281 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 TTC24A2A3L6 582 aaPredicted RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 DPM1O60762 260 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 TOP3BO95985 862 aaKnown RBP6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ABCG1P45844 678 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 NDUFAF6Q330K2 333 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 PARP15Q460N3 678 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ATP13A5Q4VNC0 1218 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ELMO1Q92556 727 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 BIRC7Q96CA5 298 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 HAVCR1Q96D42 359 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 KCNS3Q9BQ31 491 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ZNF416Q9BWM5 594 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 BRINP2Q9C0B6 783 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 GPRC5CQ9NQ84 441 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 GLTPQ9NZD2 209 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 CDH10Q9Y6N8 788 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 ANKRD31Q8N7Z5 1873 aa6.45□□□□□ -1.38
TRIM38-201ENST00000357085 WRBO00258 174 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 PDCD5O14737 125 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 EFNA1P20827 205 aaPredicted RBP6.44□□□□□ -1.38
TRIM38-201ENST00000357085 IDUAP35475 653 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 SELENBP1Q13228 472 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 PAFAH1B3Q15102 231 aaKnown RBP6.44□□□□□ -1.38
TRIM38-201ENST00000357085 STK11Q15831 433 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 WSCD2Q2TBF2 565 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 STEAP3Q658P3 488 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 OXR1Q8N573 874 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 CLDN22Q8N7P3 220 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 KCTD13Q8WZ19 329 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 P2RY11Q96G91 374 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 SPATA33Q96N06 139 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 FAM83DQ9H4H8 585 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 FAM118AQ9NWS6 357 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 TRAPPC4Q9Y296 219 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 PIGBOS1A0A0B4J2F0 54 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 A8MVJ9 347 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 AP3D1O14617 1153 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 SGTAO43765 313 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 NOBOXO60393 691 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 LTFP02788 710 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 ESR1P03372 595 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 IFNW1P05000 195 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 PTPN3P26045 913 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 CYP4F8P98187 520 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 GALEQ14376 348 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 FAM189A2Q15884 450 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 ADNP2Q6IQ32 1131 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 SKA2Q8WVK7 121 aaPredicted RBP6.44□□□□□ -1.38
TRIM38-201ENST00000357085 HERPUD2Q9BSE4 406 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 POLR1EQ9GZS1 481 aaKnown RBP6.44□□□□□ -1.38
TRIM38-201ENST00000357085 DDIT4Q9NX09 232 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 PDP1Q9P0J1 537 aaPredicted RBP6.44□□□□□ -1.38
TRIM38-201ENST00000357085 KLQ9UEF7 1012 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 CMAHPQ9Y471 501 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 A6NL46 340 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 SPATA31C2B4DYI2 1134 aa6.44□□□□□ -1.38
TRIM38-201ENST00000357085 CAPNS1P04632 268 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms