RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 HINT2Q9BX68 163 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 REV1Q9UBZ9 1251 aa16.96■□□□□ 0.31
COL27A1-201ENST00000356083 METTL21EPA6NDL7 271 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 RAB4AP20338 218 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 CYP2C18P33260 490 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 STK32AQ8WU08 396 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 OR10A4Q9H209 315 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 TAS2R14Q9NYV8 317 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 SHROOM3Q8TF72 1996 aa16.96■□□□□ 0.3
COL27A1-201ENST00000356083 CCL22O00626 93 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 MPPED1O15442 326 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 BRINP1O60477 761 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 IFNW1P05000 195 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 GRK1Q15835 563 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 RAB43Q86YS6 212 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 OR8S1Q8NH09 359 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 KCNJ9Q92806 393 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 EBNA1BP2Q99848 306 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ORAI3Q9BRQ5 295 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 GPATCH1Q9BRR8 931 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ELOVL7A1L3X0 281 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ACTL6BO94805 426 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 CAP1Q01518 475 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 NIPAL4Q0D2K0 466 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.31e-20■■■□□ 19.1
COL27A1-201ENST00000356083 NET1Q7Z628 596 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 LAPTM4BQ86VI4 370 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 OR6N1Q8NGY5 312 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 PHOSPHO1Q8TCT1 267 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 GLOD4Q9HC38 313 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SNX10Q9Y5X0 201 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SLC35F4A4IF30 521 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 WTIPA6NIX2 430 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ITGAVP06756 1048 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF311Q5JNZ3 666 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 IL23RQ5VWK5 629 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 DHDDSQ86SQ9 333 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SH3YL1Q96HL8 342 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 GPR21Q99679 349 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ACO2Q99798 780 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 TMEM88BA6NKF7 163 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 LYPLA1O75608 230 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF12P17014 697 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SCGB1C1Q8TD33 95 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 MAFIPQ8WZ33 124 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 M0R2N6 131 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 HNF1BP35680 557 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 FASLGP48023 281 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SLC35G5Q96KT7 338 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 RBM4BQ9BQ04 359 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 RBM4Q9BWF3 364 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 KANTRA0A1W2PQU2 76 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ACP5P13686 325 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 RNF144AP50876 292 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 TMEM203Q969S6 136 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 TM9SF2Q99805 663 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 ASPNQ9BXN1 380 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 WDR12Q9GZL7 423 aaKnown RBP16.95■□□□□ 0.3
COL27A1-201ENST00000356083 PRDM16Q9HAZ2 1276 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
COL27A1-201ENST00000356083 CH25HO95992 272 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ALPPP05187 535 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 HOXC6P09630 235 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 HNRNPKP61978 463 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■■■■□ 23.6
COL27A1-201ENST00000356083 RPL7AP62424 266 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 PLP2Q04941 152 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 FAM47BQ8NA70 645 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CD300LFQ8TDQ1 290 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ALPK1Q96QP1 1244 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 C14orf105Q9NVL8 296 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 E9PAM4 449 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 UFD1Q92890 307 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 SAR1AQ9NR31 198 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 TNFSF12O43508 249 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ACTR1BP42025 376 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ANKRD26P1Q6NSI1 321 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ASB18Q6ZVZ8 466 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CACNG4Q9UBN1 327 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 RAP2CQ9Y3L5 183 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 GRXCR1A8MXD5 290 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ERBB2P04626 1255 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 PPP4CP60510 307 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 C9orf57Q5W0N0 161 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 FBRSQ9HAH7 460 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF221Q9UK13 617 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 SYNGR4O95473 234 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CSF2P04141 144 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 TLE2Q04725 743 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 AIMP2Q13155 320 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 BLMHQ13867 455 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms