RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 NCBP2P52298 156 aaKnown RBP eCLIP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ANKRD22Q5VYY1 191 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 TMEM220Q6QAJ8 160 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 GPR151Q8TDV0 419 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 MFSD3Q96ES6 412 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 MCCC2Q9HCC0 563 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 A0A1W2PRQ8 180 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ELOA3DA6NLF2 546 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ACOX3O15254 700 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PRKD3O94806 890 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 IFI30P13284 250 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CSTF2P33240 577 aaKnown RBP eCLIP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CCNFP41002 786 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 XKP51811 444 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ELOA3BQ3SY89 546 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PDE12Q6L8Q7 609 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 SLC51AQ86UW1 340 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ELOA3Q8NG57 546 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 SPATA22Q8NHS9 363 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 POLR2J3Q9H1A7 115 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CCDC86Q9H6F5 360 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 LYARQ9NX58 379 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 MKLN1Q9UL63 735 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ADAMTS13Q76LX8 1427 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 M0R036 132 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CCL22O00626 93 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 TSPAN1O60635 241 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CSN2P05814 226 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PBX3P40426 434 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 IST1P53990 364 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ECM1Q16610 540 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PTF1AQ7RTS3 328 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 OXR1Q8N573 874 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ZDHHC4Q9NPG8 344 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SMIM28A0A1B0GU29 152 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TCAF2A6NFQ2 919 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 LRCH4O75427 683 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SCGB1D2O95969 90 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PEPDP12955 493 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ANXA8P13928 327 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CD36P16671 472 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 EFNA1P20827 205 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 APLP1P51693 650 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ARFRP1Q13795 201 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF460Q14592 562 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 KHDC1Q4VXA5 237 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TMEM145Q8NBT3 493 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 DQX1Q8TE96 717 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 MRPS30Q9NP92 439 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ATPIF1Q9UII2 106 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ERVK-11Q9UQG0 969 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ARL5CA6NH57 179 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 H6PDO95479 791 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CDH1P12830 882 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SRCP12931 536 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CCNHP51946 323 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PTP4A2Q12974 167 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TOR1AIP1Q5JTV8 583 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 COLEC12Q5KU26 742 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TDRPQ86YL5 185 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF676Q8N7Q3 588 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 HEPHQ9BQS7 1158 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 THUMPD1Q9NXG2 353 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 NR2E1Q9Y466 385 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 IRF6O14896 467 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 LGR5O75473 907 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 GJA1P17302 382 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ARPC4P59998 168 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SP3Q02447 781 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 DPY19L1Q2PZI1 675 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 KIAA1161Q6NSJ0 714 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 MPP5Q8N3R9 675 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TOMM5Q8N4H5 51 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF366Q8N895 744 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 FAM156AQ8NDB6 213 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 OR10G2Q8NGC3 310 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 C9orf43Q8TAL5 461 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 EZH1Q92800 747 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PLD4Q96BZ4 506 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CAMK1GQ96NX5 476 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 FKBPLQ9UIM3 349 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 A0A1B0GVM2 712 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 C4BPAP04003 597 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CNPY1Q3B7I2 92 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ANKRD26P1Q6NSI1 321 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 IQCHQ86VS3 1027 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 CPNE9Q8IYJ1 553 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TMEM109Q9BVC6 243 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PRDM4Q9UKN5 801 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 ENPP3O14638 875 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 EDNRAP25101 427 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PLEKHG6Q3KR16 790 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 PITRM1Q5JRX3 1037 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SLC22A17Q8WUG5 538 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 SMPDL3BQ92485 455 aa14.61□□□□□ -0.07
LMX1B-201ENST00000355497 TUBGCP5Q96RT8 1024 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms