RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CPSF4LA6NMK7 179 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SPAM1P38567 509 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 STT3AP46977 705 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 ARSFP54793 590 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 RHEBQ15382 184 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SDR16C5Q8N3Y7 309 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 OXR1Q8N573 874 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PYURFQ96I23 114 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZSWIM3Q96MP5 696 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.48□□□□□ -0.417e-7■■■■■ 39.8
SYNCRIP-201ENST00000355238 CLDN11O75508 207 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR2B3O76000 313 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 GRIA2P42262 883 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PTGER3P43115 390 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CDKL1Q00532 357 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CHIT1Q13231 466 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 TLR1Q15399 786 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PYHIN1Q6K0P9 492 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SPATA22Q8NHS9 363 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 GEMIN6Q8WXD5 167 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 A0A1W2PP18 115 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 M0R036 132 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 RFPL2O75678 378 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PRPS1L1P21108 318 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 RHBDL3P58872 404 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 TPGS1Q6ZTW0 290 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PPP1R13LQ8WUF5 828 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 NCSTNQ92542 709 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC45A3Q96JT2 553 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 WACQ9BTA9 647 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF358Q9NW07 568 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 TYROBPO43914 113 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 PRMT3O60678 531 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 GALNTL5Q7Z4T8 443 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 NEK7Q8TDX7 302 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF350Q9GZX5 532 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 THUMPD1Q9NXG2 353 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 MRTO4Q9UKD2 239 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 FZD10Q9ULW2 581 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 COQ4Q9Y3A0 265 aa12.48□□□□□ -0.41
SYNCRIP-201ENST00000355238 A8MT66 165 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 GIMD1P0DJR0 217 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 UBAP2Q5T6F2 1119 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SH3PXD2AQ5TCZ1 1133 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZCCHC12Q6PEW1 402 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 EQTNQ9NQ60 294 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 TAS2R9Q9NYW1 312 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 RAI2Q9Y5P3 530 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 TEX264Q9Y6I9 313 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ISM1B1AKI9 464 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 E9PAM4 449 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SCN2BO60939 215 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 HPRP00739 348 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 C8GP07360 202 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PTPRAP18433 802 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SCARB2Q14108 478 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 MPP2Q14168 576 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 HSDL1Q3SXM5 330 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 HBEGFQ99075 208 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PAQR5Q9NXK6 330 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 FUOMA2VDF0 154 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 B4GALT5O43286 388 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC19A2O60779 497 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ATG13O75143 517 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 RASAL1O95294 804 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CST3P01034 146 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PBX3P40426 434 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PRR5P85299 388 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 NAE1Q13564 534 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CBFBQ13951 182 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CBX2Q14781 532 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ATP6AP1Q15904 470 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CRB2Q5IJ48 1285 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PAQR7Q86WK9 346 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 BRSK1Q8TDC3 778 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC39A3Q9BRY0 314 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 TM9SF3Q9HD45 589 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC9A3R1O14745 358 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 DPYSL2Q16555 572 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 FBXO48Q5FWF7 155 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SNX20Q7Z614 316 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 CIR1Q86X95 450 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms