RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 AGAP6Q5VW22 663 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 TMEM65Q6PI78 240 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 ERMP1Q7Z2K6 904 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 MICU2Q8IYU8 434 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 PARP8Q8N3A8 854 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 KDM1BQ8NB78 822 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 OR52K1Q8NGK4 314 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 ZFP90Q8TF47 636 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 MAGED4Q96JG8 741 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 AGAP4Q96P64 663 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 TRAF4Q9BUZ4 470 aaPredicted RBP10.62□□□□□ -0.71
SND1-201ENST00000354725 PRDM8Q9NQV8 689 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 HES2Q9Y543 173 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 GMPPBQ9Y5P6 360 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 KCNE2Q9Y6J6 123 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 DOCK4Q8N1I0 1966 aa10.62□□□□□ -0.71
SND1-201ENST00000354725 GSAPA4D1B5 854 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 KPNA7A9QM74 516 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 NUPL2O15504 423 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 DLGAP3O95886 979 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 JUNP05412 331 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 IFI30P13284 250 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 DDCP20711 480 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 IMPDH1P20839 514 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 MATN1P21941 496 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 MPSTP25325 297 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ELOAQ14241 798 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 TEAD4Q15561 434 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SLC14A2Q15849 920 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM214AQ32MH5 1076 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 Q5PR19 223 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 UBXN11Q5T124 520 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 NPWQ8N729 165 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM47BQ8NA70 645 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SERPINI1Q99574 410 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 C12orf57Q99622 126 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 TMEM168Q9H0V1 697 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 RNF24Q9Y225 148 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 WISP3O95389 354 aaPredicted RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 LMO2P25791 158 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 DNAJB13P59910 316 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 KIAA1324Q6UXG2 1013 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 PHC2Q8IXK0 858 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ZNF786Q8N393 782 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 TEKT5Q96M29 485 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ILKAPQ9H0C8 392 aaPredicted RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 PIGVQ9NUD9 493 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ZDHHC2Q9UIJ5 367 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 GINS2Q9Y248 185 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 TDRD15B5MCY1 1934 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM72CH0Y354 149 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SYN3O14994 580 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 KCNE1P15382 129 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SYN1P17600 705 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 TFEBP19484 476 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 WARSP23381 471 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 ARL4AP40617 200 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ARCN1P48444 511 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 ATXN3P54252 364 aaPredicted RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 MRPS22P82650 360 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 PCBP1Q15365 356 aaKnown RBP eCLIP10.61□□□□□ -0.716e-7■■■□□ 18.5
SND1-201ENST00000354725 MGAT5BQ3V5L5 792 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 RAB41Q5JT25 222 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM72AQ5TYM5 149 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM72DQ6L9T8 149 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 MZT2BQ6NZ67 158 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 MZT2AQ6P582 158 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SYCE2Q6PIF2 218 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SLC16A12Q6ZSM3 486 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 PIWIL3Q7Z3Z3 882 aaKnown RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 CDH24Q86UP0 819 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FAM72BQ86X60 149 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 FTHL17Q9BXU8 183 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 ACE2Q9BYF1 805 aaPredicted RBP10.61□□□□□ -0.71
SND1-201ENST00000354725 ANKRD60Q9BZ19 345 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 EVA1BQ9NVM1 165 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 PPP1R14DQ9NXH3 145 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 PCDHGA7Q9Y5G6 932 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 PRUNE2Q8WUY3 3088 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 PLXNA4Q9HCM2 1894 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 NUP205Q92621 2012 aa10.61□□□□□ -0.71
SND1-201ENST00000354725 SYNJ2BP-COX16A0A087WUM0 186 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 SMAD9O15198 467 aaKnown RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 NPHS1O60500 1241 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 GJB3O75712 270 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 MAPK12P53778 367 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 PRKAA1Q13131 559 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 GRM3Q14832 879 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 RPS26P11Q5JNZ5 115 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 TTC33Q6PID6 262 aaPredicted RBP10.6□□□□□ -0.71
SND1-201ENST00000354725 LHFPL2Q6ZUX7 228 aa10.6□□□□□ -0.71
SND1-201ENST00000354725 C18orf25Q96B23 403 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms