RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 CHRNEQ04844 493 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 LRIF1Q5T3J3 769 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CCSAPQ6IQ19 270 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 LIN54Q6MZP7 749 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 HMBOX1Q6NT76 420 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GCNT7Q6ZNI0 430 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SSX6Q7RTT6 188 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PDSS2Q86YH6 399 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PROKR2Q8NFJ6 384 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 NSMCE2Q96MF7 247 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CST11Q9H112 138 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CLEC4MQ9H2X3 399 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 KCNF1Q9H3M0 494 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 FAM86C1Q9NVL1 165 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 MCUBQ9NWR8 336 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 KCND3Q9UK17 655 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 IKZF3Q9UKT9 509 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 MTO1Q9Y2Z2 717 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 WIF1Q9Y5W5 379 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ACTL7BQ9Y614 415 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 MYO3AQ8NEV4 1616 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GABRR3A8MPY1 467 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 MKRN2OSH3BPM6 223 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 BTN3A3O00478 584 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PDPK1O15530 556 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ERI3O43414 337 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ADAMTS4O75173 837 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CHRNGP07510 517 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 THRAP10827 490 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 EEFSECP57772 596 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ETF1P62495 437 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 NPRL3Q12980 569 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SHHQ15465 462 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 STEAP3Q658P3 488 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ADNP2Q6IQ32 1131 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 TTC33Q6PID6 262 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 BRAT1Q6PJG6 821 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GRAMD2AQ8IUY3 354 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CCDC103Q8IW40 242 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 OR2L8Q8NGY9 312 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 FAM110BQ8TC76 370 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RLN3Q8WXF3 142 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 FBXL8Q96CD0 374 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 TIMD4Q96H15 378 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RIOX1Q9H6W3 641 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PLGRKTQ9HBL7 147 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CLEC1BQ9P126 229 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 OGDHLQ9ULD0 1010 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PCDHB14Q9Y5E9 798 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 VWDEQ8N2E2 1590 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 KCNU1A8MYU2 1149 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 TRIM24O15164 1050 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RNF13O43567 381 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 STAT5AP42229 794 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ALDH3A2P51648 485 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 TUBB3Q13509 450 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PCBP2Q15366 365 aaKnown RBP eCLIP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GPR68Q15743 365 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CST6Q15828 149 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 OCLNQ16625 522 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 NKPD1Q17RQ9 610 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SLC35G1Q2M3R5 365 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SLC25A25Q6KCM7 469 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CXorf57Q6NSI4 855 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 KIAA1161Q6NSJ0 714 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 LINC00696Q6ZRV3 163 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 Q6ZSR6 202 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 OFCC1Q8IZS5 231 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ZNF565Q8N9K5 539 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 DEFB124Q8NES8 71 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ITFG1Q8TB96 612 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PNPT1Q8TCS8 783 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 KAT2AQ92830 837 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 UTP23Q9BRU9 249 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 EFCAB1Q9HAE3 211 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 HMG20AQ9NP66 347 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 DNAJB11Q9UBS4 358 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 TAC3Q9UHF0 121 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 USP15Q9Y4E8 981 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 REREQ9P2R6 1566 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PHGDHO43175 533 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GRID2O43424 1007 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RRP9O43818 475 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 GABBR2O75899 941 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PROSCO94903 275 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 PAK4O96013 591 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ITGA5P08648 1049 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 COX6B1P14854 86 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SHMT2P34897 504 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RAD52P43351 418 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RPS9P46781 194 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 CEBPGP53567 150 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SNU13P55769 128 aaKnown RBP5.03□□□□□ -1.6
CKAP5-202ENST00000354558 ITGA1P56199 1179 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 SLC1A5Q15758 541 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 MYLK3Q32MK0 819 aa5.03□□□□□ -1.6
CKAP5-202ENST00000354558 RFTN2Q52LD8 501 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms