RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PCDHA12Q9UN75 941 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 BTBD3Q9Y2F9 522 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CAMSAP1Q5T5Y3 1602 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 USP24Q9UPU5 2620 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DPPA5A6NC42 116 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 OOEPA6NGQ2 149 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MANSC4A6NHS7 340 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FAM90A26D6RGX4 464 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 GLCEO94923 617 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SERPING1P05155 500 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 HEXBP07686 556 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PLA2G4BP0C869 781 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 NR2F2P24468 414 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PBLDP30039 288 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CDC25CP30307 473 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 HNRNPH1P31943 449 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DUTP33316 252 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 OR3A1P47881 315 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ARSEP51690 589 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 NAGLUP54802 743 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CDK3Q00526 305 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DSC1Q08554 894 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 HSPB3Q12988 150 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PLA2G7Q13093 441 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 VEZF1Q14119 521 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MVPQ14764 893 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PTPAQ15257 358 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MIIPQ5JXC2 388 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C6orf10Q5SRN2 563 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SFMBT2Q5VUG0 894 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ARMC6Q6NXE6 501 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C11orf88Q6PI97 169 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF793Q6ZN11 406 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C11orf57Q6ZUT1 292 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CRYBG2Q8N1P7 616 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CNNM3Q8NE01 707 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TSPAN14Q8NG11 270 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 OR11H4Q8NGC9 324 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DENND1AQ8TEH3 1009 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DDB2Q92466 427 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TRIM44Q96DX7 344 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SGF29Q96ES7 293 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SFXN2Q96NB2 322 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ERP44Q9BS26 406 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 QTRT1Q9BXR0 403 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CSTL1Q9H114 145 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FN3KQ9H479 309 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 COQ10BQ9H8M1 238 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZBTB40Q9NUA8 1239 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM45AQ9NWC5 275 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 OR6C3Q9NZP0 311 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 XPO7Q9UIA9 1087 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CNOT11Q9UKZ1 510 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 GPR132Q9UNW8 380 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 AURKCQ9UQB9 309 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM272A0A1B0GTI8 110 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 A0A1W2PP11 408 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 A0A1W2PPQ1 181 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DUXAA6NLW8 204 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 H3BMM5 538 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PLOD2O00469 737 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SLC16A5O15375 505 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 NDUFS4O43181 175 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RIPK2O43353 540 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MOCS3O95396 460 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CHRNGP07510 517 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KRT19P08727 400 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CBLP22681 906 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 GPR12P47775 334 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 LHX1P48742 406 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SRP54P61011 504 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KCNJ10P78508 379 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 EGR4Q05215 589 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RASGEF1BQ0VAM2 473 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PRAMEF7Q5VXH5 474 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 GGNBP1Q5YKI7 109 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C18orf63Q68DL7 685 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FAM198BQ6UWH4 519 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MSANTD1Q6ZTZ1 278 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TOM1L2Q6ZVM7 507 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SFTPA2Q8IWL1 248 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KLHDC1Q8N7A1 406 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF398Q8TD17 642 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DTNBP1Q96EV8 351 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MOV10L1Q9BXT6 1211 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ISCUQ9H1K1 167 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RNPEPL1Q9HAU8 725 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 INTS10Q9NVR2 710 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 AGO2Q9UKV8 859 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TDRKHQ9Y2W6 561 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 INSL5Q9Y5Q6 135 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KIAA1551Q9HCM1 1747 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ANKDD1BA6NHY2 528 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 BTBD19C9JJ37 291 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HSPA12AO43301 675 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HKR1P10072 659 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GOT1P17174 413 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PAX7P23759 505 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GPTP24298 496 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms