RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CASP5P51878 434 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 DCAKDQ8WVC6 231 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 LIASO43766 372 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PTX3P26022 381 aaPredicted RBP13.21□□□□□ -0.29
LMBR1-201ENST00000353442 GNA12Q03113 381 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 BRMS1LQ5PSV4 323 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 AHSA2Q719I0 299 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 TWIST2Q8WVJ9 160 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 CDH4P55283 916 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 SLC26A5P58743 744 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 SGCAQ16586 387 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 ALG10BQ5I7T1 473 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 GLYATQ6IB77 296 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 SLC7A6OSQ96CW6 309 aaPredicted RBP13.21□□□□□ -0.29
LMBR1-201ENST00000353442 WDR55Q9H6Y2 383 aaPredicted RBP13.21□□□□□ -0.29
LMBR1-201ENST00000353442 AP1M2Q9Y6Q5 423 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PRAMEF33A0A0G2JMD5 474 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PRAMEF10O60809 474 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 C1orf61Q13536 156 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 TMEM35AQ53FP2 167 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 PRRT3Q5FWE3 981 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 HCN4Q9Y3Q4 1203 aa13.21□□□□□ -0.29
LMBR1-201ENST00000353442 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 SMIM35A0A1B0GVV1 85 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 C11orf98E9PRG8 122 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 SHBGP04278 402 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 HEPACAMQ14CZ8 416 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 SFRP1Q8N474 314 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 PIWIL2Q8TC59 973 aaKnown RBP13.21□□□□□ -0.3
LMBR1-201ENST00000353442 TM9SF2Q99805 663 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 ORAI3Q9BRQ5 295 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 MDFIC2A0A1B0GVS7 189 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.3
LMBR1-201ENST00000353442 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.31e-6■■□□□ 13.4
LMBR1-201ENST00000353442 ST3GAL1Q11201 340 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 TXNDC8Q6A555 127 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 CHCHD6Q9BRQ6 235 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.3
LMBR1-201ENST00000353442 GSKIPQ9P0R6 139 aa13.21□□□□□ -0.3
LMBR1-201ENST00000353442 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 GNRHRP30968 328 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MPIP34949 423 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 TEAD2Q15562 447 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 CCL14Q16627 93 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 HPS1Q92902 700 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 KCNK4Q9NYG8 393 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 EIF2B4Q9UI10 523 aaKnown RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PCDHGC3Q9UN70 934 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 ANKRD34BA5PLL1 514 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 NPIPA2E9PIF3 369 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 NPIPA3F8WFD2 350 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 KLF8O95600 359 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 C19orf25Q9UFG5 118 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 SLC30A4O14863 429 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 JOSD2Q8TAC2 188 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MAPK15Q8TD08 544 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PYCR2Q96C36 320 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MED28Q9H204 178 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PSMG1O95456 288 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 ALPIP09923 528 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 APLP1P51693 650 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 BICRALQ6AI39 1079 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 TMEM225Q6GV28 225 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 OR8K5Q8NH50 307 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■□□ 16.9
LMBR1-201ENST00000353442 TMEM11P17152 192 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 S100A2P29034 98 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 BDKRB1P46663 353 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 MFSD11O43934 449 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 SDC3O75056 442 aa13.2□□□□□ -0.3
LMBR1-201ENST00000353442 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
LMBR1-201ENST00000353442 CCR8P51685 355 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms