RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 POLR3HQ9Y535 204 aaPredicted RBP23.13■■□□□ 1.29
USP25-203ENST00000351097 AGAP14A8MT82 685 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 TTC34A8MYJ7 566 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 KATNA1O75449 491 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 HMOX2P30519 316 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 MTPNP58546 118 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 TRAF3Q13114 568 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 DCTN2Q13561 401 aaKnown RBP23.13■■□□□ 1.29
USP25-203ENST00000351097 ABRAXAS2Q15018 415 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 GPR33Q49SQ1 333 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 USP51Q70EK9 711 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 DTWD1Q8N5C7 304 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 ISOC1Q96CN7 298 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 IPPKQ9H8X2 491 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 B4GALT6Q9UBX8 382 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 GNPTGQ9UJJ9 305 aa23.13■■□□□ 1.29
USP25-203ENST00000351097 SNAP29O95721 258 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 CISD3P0C7P0 127 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 RECQLP46063 649 aaPredicted RBP23.12■■□□□ 1.29
USP25-203ENST00000351097 PTPN5P54829 565 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 SELPLGQ14242 412 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 CRY1Q16526 586 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 PYCR3Q53H96 274 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 LYPLAL1Q5VWZ2 237 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 RFLNAQ6ZTI6 216 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 MILR1Q7Z6M3 343 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 NXPE1Q8N323 547 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 LKAAEAR1Q8TD35 194 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 PPP3R2Q96LZ3 170 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 NPLQ9BXD5 320 aaPredicted RBP23.12■■□□□ 1.29
USP25-203ENST00000351097 CROCCQ5TZA2 2017 aa23.12■■□□□ 1.29
USP25-203ENST00000351097 MSH3P20585 1137 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 RGS4P49798 205 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 DGKQP52824 942 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 ADARB1P78563 741 aaKnown RBP23.11■■□□□ 1.29
USP25-203ENST00000351097 RFTN2Q52LD8 501 aaPredicted RBP23.11■■□□□ 1.29
USP25-203ENST00000351097 OR8J3Q8NGG0 315 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 YTHDF1Q9BYJ9 559 aaKnown RBP23.11■■□□□ 1.29
USP25-203ENST00000351097 A0A1W2PQ67 120 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 ANXA6P08133 673 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 C1SP09871 688 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 ADH5P11766 374 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 NRIP1P48552 1158 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 SHHQ15465 462 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 GPR180Q86V85 440 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 C12orf40Q86WS4 652 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 FAM81AQ8TBF8 368 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 HEPHQ9BQS7 1158 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 NSUN3Q9H649 340 aaKnown RBP23.11■■□□□ 1.29
USP25-203ENST00000351097 PKD2L2Q9NZM6 624 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 OARD1Q9Y530 152 aa23.11■■□□□ 1.29
USP25-203ENST00000351097 H0YAE9 185 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 DEAF1O75398 565 aaPredicted RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 RSL1D1O76021 490 aaKnown RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 ITGB6P18564 788 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 PBX2P40425 430 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 HSPA7P48741 367 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 DGKGP49619 791 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 NUP107P57740 925 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 POLR2LP62875 67 aaKnown RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 TBPL2Q6SJ96 375 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 AADATQ8N5Z0 425 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 VN1R2Q8NFZ6 395 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 GFM2Q969S9 779 aaKnown RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 HTATIP2Q9BUP3 242 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 FAM126AQ9BYI3 521 aaPredicted RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 EBF1Q9UH73 591 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 CCL27Q9Y4X3 112 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 RAP2AP10114 183 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 GGT1P19440 569 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 TTKP33981 857 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 BRAT1Q6PJG6 821 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 MACC1Q6ZN28 852 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 ZBTB18Q99592 522 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 MTG2Q9H4K7 406 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 SOX17Q9H6I2 414 aaPredicted RBP23.1■■□□□ 1.29
USP25-203ENST00000351097 NTN4Q9HB63 628 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 ELOVL2Q9NXB9 296 aa23.1■■□□□ 1.29
USP25-203ENST00000351097 TAPBPO15533 448 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 HOXC11O43248 304 aaPredicted RBP23.09■■□□□ 1.29
USP25-203ENST00000351097 LEFTY1O75610 366 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 SLC25A14O95258 325 aaPredicted RBP23.09■■□□□ 1.29
USP25-203ENST00000351097 KCNH1O95259 989 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 PAPLNO95428 1278 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 GUCA1CO95843 209 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 ALBP02768 609 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 SLC2A4P14672 509 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 NNMTP40261 264 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 KIAA0040Q15053 153 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 DUSP6Q16828 381 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 ATP13A5Q4VNC0 1218 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 FAM98BQ52LJ0 330 aaKnown RBP23.09■■□□□ 1.29
USP25-203ENST00000351097 FAM78AQ5JUQ0 283 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 DHRS4L2Q6PKH6 230 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 NPAS3Q8IXF0 933 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 NUDT8Q8WV74 236 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 CCDC115Q96NT0 180 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 EIF3LQ9Y262 564 aaKnown RBP23.09■■□□□ 1.29
USP25-203ENST00000351097 NEUROG3Q9Y4Z2 214 aa23.09■■□□□ 1.29
USP25-203ENST00000351097 RGS14O43566 566 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms