RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 EPORP19235 508 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 ALDH4A1P30038 563 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 GP2P55259 537 aaKnown RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PLD1Q13393 1074 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 RAPSNQ13702 412 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PGS1Q32NB8 556 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 USP39Q53GS9 565 aaKnown RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 LAIR1Q6GTX8 287 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 DCP2Q8IU60 420 aaKnown RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 CHPFQ8IZ52 775 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.429e-7■■■■□ 25.3
PTP4A3-202ENST00000349124 TNKS2Q9H2K2 1166 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 SERHLQ9NQF3 203 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 TMEM45AQ9NWC5 275 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 GPRC5BQ9NZH0 403 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PCDHB1Q9Y5F3 818 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PGLSO95336 258 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PDYNP01213 254 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 HNF1BP35680 557 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 OPRL1P41146 370 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 CARD16Q5EG05 197 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 GPRC6AQ5T6X5 926 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 CACHD1Q5VU97 1274 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 CYP4Z1Q86W10 505 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 TERB1Q8NA31 727 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PCSK9Q8NBP7 692 aaKnown RBP17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 PJA1Q8NG27 643 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 MYO19Q96H55 970 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 MAGEE1Q9HCI5 957 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 RNF186Q9NXI6 227 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 BAG5Q9UL15 447 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 COQ6Q9Y2Z9 468 aa17.68■□□□□ 0.42
PTP4A3-202ENST00000349124 SLC1A7O00341 560 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 CLPXO76031 633 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 FMO3P31513 532 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RGS4P49798 205 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RGMBQ6NW40 437 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 TRIM46Q7Z4K8 759 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 SAPCD2Q86UD0 394 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 ZSWIM9Q86XI8 627 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 ZBTB2Q8N680 514 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 ABHD11Q8NFV4 315 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RAB2BQ8WUD1 216 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 FAM120BQ96EK7 910 aaKnown RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 CNDP2Q96KP4 475 aaKnown RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RBM4BQ9BQ04 359 aaKnown RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RBM4Q9BWF3 364 aaKnown RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 CLEC4EQ9ULY5 219 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 PRRC2BQ5JSZ5 2229 aaKnown RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 TRBV5-3A0A0A0MS03 114 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 TBKBP1A7MCY6 615 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 IFRD1O00458 451 aaPredicted RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 PER2O15055 1255 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 BNIP3LO60238 219 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 IL6P05231 212 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 IDUAP35475 653 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 MAP2K4P45985 399 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 GZMMP51124 257 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 CEP68Q76N32 757 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 CHST9Q7L1S5 443 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 GPR149Q86SP6 731 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 IGFN1Q86VF2 1251 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RBFAQ8N0V3 343 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 UBE2FQ969M7 185 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 NRBF2Q96F24 287 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 KLF16Q9BXK1 252 aaPredicted RBP17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 RAD21L1Q9H4I0 556 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 PPT2Q9UMR5 302 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 VPS4AQ9UN37 437 aa17.67■□□□□ 0.42
PTP4A3-202ENST00000349124 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 SLC28A1O00337 649 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 HPRP00739 348 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 EPB42P16452 691 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 EFNA1P20827 205 aaPredicted RBP17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 DGKAP23743 735 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 EPHA2P29317 976 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 IL5RAQ01344 420 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 CYP2A13Q16696 494 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 CERS6Q6ZMG9 384 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 GPN2Q9H9Y4 310 aaPredicted RBP17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 C1orf109Q9NX04 203 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 SELENONQ9NZV5 590 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 ERVK-18Q9QC07 812 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 CRLS1Q9UJA2 301 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 ABCG2Q9UNQ0 655 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 OR51B4Q9Y5P0 310 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 FUOMA2VDF0 154 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 SCELO95171 688 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 ZNF682O95780 498 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 MSH3P20585 1137 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 PCMT1P22061 227 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 SMAD3P84022 425 aaKnown RBP17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 EMX1Q04741 257 aaPredicted RBP17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 CD300CQ08708 224 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 CDK5R2Q13319 367 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 TRIM74Q86UV6 250 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 TRIM73Q86UV7 250 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 ARL10Q8N8L6 244 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 NODALQ96S42 347 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms