RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SDHDO14521 159 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 PDCD5O14737 125 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 TBL1XO60907 577 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 BMP2P12643 396 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 XKP51811 444 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 DPEP3Q9H4B8 488 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 DCCP43146 1447 aa17.73■□□□□ 0.43
SMC4-201ENST00000344722 ECI2O75521 394 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 PRKACGP22612 351 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 CCR4P51679 360 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 AMIGO1Q86WK6 493 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 PLD6Q8N2A8 252 aaKnown RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 RNASE11Q8TAA1 199 aaKnown RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 LMO3Q8TAP4 145 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 XAGE5Q8WWM1 108 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 LMAN2LQ9H0V9 348 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 PRKAB1Q9Y478 270 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 FAM47E-STBD1D6RA91 191 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 HCAR3P49019 387 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 TARDBPQ13148 414 aaKnown RBP eCLIP17.72■□□□□ 0.433e-6■■■■□ 21.4
SMC4-201ENST00000344722 SEMA3AQ14563 771 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 TAF1AQ15573 450 aaPredicted RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 FBXO42Q6P3S6 717 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ZNF367Q7RTV3 350 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 TIFAQ96CG3 184 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 PTPRJQ12913 1337 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 DNTTP04053 509 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ALDOAP04075 364 aaKnown RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 PRPS1L1P21108 318 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 HNRNPFP52597 415 aaKnown RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 NUDT6P53370 316 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 RAPSNQ13702 412 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ZSCAN5AQ9BUG6 496 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 HMGXB4Q9UGU5 601 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 PSAT1Q9Y617 370 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 A0A1W2PQH9 124 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ENTPD6O75354 484 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 CLDN11O75508 207 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 CD247P20963 164 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ADORA2AP29274 412 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 CHIT1Q13231 466 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 ANKDD1AQ495B1 522 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 SNX33Q8WV41 574 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 MCMBPQ9BTE3 642 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
SMC4-201ENST00000344722 THUMPD1Q9NXG2 353 aaKnown RBP17.72■□□□□ 0.43
SMC4-201ENST00000344722 SMIM28A0A1B0GU29 152 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 CLIC1O00299 241 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 MATN1P21941 496 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 HTR1EP28566 365 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 DGKQP52824 942 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 PPP1R8Q12972 351 aaKnown RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 CYS1Q717R9 158 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 TAC4Q86UU9 113 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 TMIGD2Q96BF3 282 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 CCDC32Q9BV29 185 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 MEAF6Q9HAF1 191 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZNF780BQ9Y6R6 833 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 KANTRA0A1W2PQU2 76 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZNF487B1APH4 448 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 GPR25O00155 361 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 RPL6Q02878 288 aaKnown RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 ABHD18Q0P651 414 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 TAF13Q15543 124 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 HSD17B12Q53GQ0 312 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 MARCH9Q86YJ5 346 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 FKBP14Q9NWM8 211 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 COL20A1Q9P218 1284 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 UBQLN2Q9UHD9 624 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 PDPK1O15530 556 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 SPAM1P38567 509 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 DAOAP59103 153 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 IL10RBQ08334 325 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 SCARB2Q14108 478 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZNF311Q5JNZ3 666 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 TMPRSS11BQ86T26 416 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ABHD11Q8NFV4 315 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZNF486Q96H40 463 aaPredicted RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 L7N2F9 121 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 KPNA3O00505 521 aaPredicted RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZBTB7AO95365 584 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 PRKAR2AP13861 404 aaKnown RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 MAP2K4P45985 399 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ARF5P84085 180 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 RPA4Q13156 261 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 MED27Q6P2C8 311 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 ZNF675Q8TD23 568 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 HMCESQ96FZ2 354 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 TTYH2Q9BSA4 534 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 MAF1Q9H063 256 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 SLA2Q9H6Q3 261 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 RANBP3Q9H6Z4 567 aaPredicted RBP17.71■□□□□ 0.43
SMC4-201ENST00000344722 CKLFQ9UBR5 152 aa17.71■□□□□ 0.43
SMC4-201ENST00000344722 PCDH8O95206 1070 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 ITGA3P26006 1051 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 RFC2P35250 354 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 PAMR1Q6UXH9 720 aa17.71■□□□□ 0.42
SMC4-201ENST00000344722 AP2M1Q96CW1 435 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms