RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR10Q1Q8NGQ4 319 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 SORCS1Q8WY21 1168 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 FAM162AQ96A26 154 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ECHDC3Q96DC8 303 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 CLMPQ9H6B4 373 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ASAH2Q9NR71 780 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 A0A087WXM4 84 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 AREL1O15033 823 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 RAP2AP10114 183 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 TACR1P25103 407 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 NKG7Q16617 165 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 KCTD21Q4G0X4 260 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 CARD16Q5EG05 197 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ABRAXAS1Q6UWZ7 409 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 OTOP2Q7RTS6 562 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HS3ST5Q8IZT8 346 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ELMOD1Q8N336 334 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 NAT16Q8N8M0 369 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ZNF548Q8NEK5 533 aaPredicted RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 USP7Q93009 1102 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 BBS2Q9BXC9 721 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HPS4Q9NQG7 708 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 THEGQ9P2T0 379 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC22A14Q9Y267 594 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HS3ST2Q9Y278 367 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 AGAP14A8MT82 685 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 UPK3BL1B0FP48 263 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 UPK3BL2E5RIL1 263 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 LILRB3O75022 631 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 DEAF1O75398 565 aaPredicted RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 CXCL14O95715 111 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ALBP02768 609 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ASLP04424 464 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HIST1H2AGP0C0S8 130 aaPredicted RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HIST1H2ADP20671 130 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 AOAHP28039 575 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 WEE1P30291 646 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 SPINT3P49223 89 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 PRMT2P55345 433 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 USP39Q53GS9 565 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 BORAQ6PGQ7 559 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 PRR23BQ6ZRT6 265 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 C10orf111Q8N326 155 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 KREMEN2Q8NCW0 462 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HIST1H2AHQ96KK5 128 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 LMLNQ96KR4 655 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 HIST1H2AJQ99878 128 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 INPP5KQ9BT40 448 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 H2AFJQ9BTM1 129 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ZBP1Q9H171 429 aa14.53□□□□□ -0.08
VIPAS39-202ENST00000343765 ABHD14A-ACY1A0A1B0GW23 586 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 GRM6O15303 877 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 TULP3O75386 442 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 TRMUO75648 421 aaKnown RBP14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 IL6P05231 212 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 CBSLP0DN79 551 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 CBSP35520 551 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 RPS14P62263 151 aaKnown RBP14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 TUBA4AP68366 448 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 PHC1P78364 1004 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 NEK5Q6P3R8 708 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 GPR141Q7Z602 305 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 CLVS1Q8IUQ0 354 aaPredicted RBP14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 CYB5D2Q8WUJ1 264 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 P2RY13Q9BPV8 354 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 MTG2Q9H4K7 406 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 LTB4R2Q9NPC1 389 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 PCDHB14Q9Y5E9 798 aa14.52□□□□□ -0.08
VIPAS39-202ENST00000343765 ELOVL7A1L3X0 281 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 OR2AG2A6NM03 316 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 UPK1AO00322 258 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 BMP10O95393 424 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 POP4O95707 220 aaKnown RBP14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 HALP42357 657 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 ARSFP54793 590 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 SH3BGRP55822 239 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 EGLN2Q96KS0 407 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 APOLD1Q96LR9 279 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 MCCC1Q96RQ3 725 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 EBPLQ9BY08 206 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 LINC00597Q9H2U6 94 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 PCDHGA11Q9Y5H2 935 aa14.52□□□□□ -0.09
VIPAS39-202ENST00000343765 CXCR6O00574 342 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 B4GAT1O43505 415 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PRKD3O94806 890 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PABPC1P11940 636 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 MYCLP1P12525 358 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ATP1B2P14415 290 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ELK4P28324 431 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ANKRD34AQ69YU3 496 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 PATL1Q86TB9 770 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 GLB1L3Q8NCI6 653 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 CDC26Q8NHZ8 85 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 ELMO1Q92556 727 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 FOXJ1Q92949 421 aa14.51□□□□□ -0.09
VIPAS39-202ENST00000343765 SLC47A1Q96FL8 570 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms