RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NR4A2P43354 598 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ERVK-8P63133 956 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ANKDD1AQ495B1 522 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 MSANTD2Q6P1R3 559 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 BHLHB9Q6PI77 547 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 LYSMD3Q7Z3D4 306 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM199Q8N511 208 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 EEF1AKMT1Q8WVE0 214 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ING4Q9UNL4 249 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 OR10H1Q9Y4A9 318 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 MYH13Q9UKX3 1938 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM221A6NGB7 291 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TEX28O15482 410 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ALDOAP04075 364 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 AMD1P17707 334 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 BMP7P18075 431 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CLK3P49761 638 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 MXD1Q05195 221 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 GALNT2Q10471 571 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SF1Q15637 639 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 RABL3Q5HYI8 236 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM220Q6QAJ8 160 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 NPAS4Q8IUM7 802 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 PACRGLQ8N7B6 248 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 POMGNT2Q8NAT1 580 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 HDAC2Q92769 488 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 KAT2AQ92830 837 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 NUSAP1Q9BXS6 441 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SLITRK2Q9H156 845 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CCDC177Q9NQR7 707 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 PRKAB1Q9Y478 270 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TLL2Q9Y6L7 1015 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF780BQ9Y6R6 833 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 FZD9O00144 591 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 FAM189A1O60320 539 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ZBTB48P10074 688 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 IVDP26440 423 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SCNN1AP37088 669 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 HCAR3P49019 387 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TMBIM6P55061 237 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 AP1S1P61966 158 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 NFKB2Q00653 900 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 BIKQ13323 160 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 RAPSNQ13702 412 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 KCNJ8Q15842 424 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 WDR45BQ5MNZ6 344 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ERICH5Q6P6B1 374 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 C14orf80Q86SX3 495 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CLDN19Q8N6F1 224 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 GMLQ99445 158 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 MAGEE1Q9HCI5 957 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 ZBTB26Q9HCK0 441 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CTPS2Q9NRF8 586 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 EXD2Q9NVH0 621 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 RGPD5Q99666 1765 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3DA0A087WVF3 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3IA0A087WXS9 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3EA0A087X179 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3KA0A087X1G2 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3FA6NER0 549 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3LB9A6J9 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CASKO14936 926 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SLC22A2O15244 555 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TLL1O43897 1013 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 AIREO43918 545 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 AP2A2O94973 939 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CRYZL1O95825 349 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3HP0C7X1 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 RAP2AP10114 183 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 NR2F6P10588 404 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 GJA1P17302 382 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SLC9A3P48764 834 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 CDKL1Q00532 357 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 PMS2P3Q13401 168 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3GQ6DHY5 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3CQ6IPX1 549 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 MED27Q6P2C8 311 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 KBTBD6Q86V97 674 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TBC1D3Q8IZP1 549 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 C11orf65Q8NCR3 313 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TIFAQ96CG3 184 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SIPA1Q96FS4 1042 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 AHCYL2Q96HN2 611 aaKnown RBP7.91□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM209Q96SK2 561 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SYT17Q9BSW7 474 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 LRRC3Q9BY71 257 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 KCNK13Q9HB14 408 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 SIRPGQ9P1W8 387 aa7.91□□□□□ -1.14
UBE4B-202ENST00000343090 FAM172BPA6NC97 362 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 H3BMQ9 156 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 AXIN1O15169 862 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 RHDQ02161 417 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 CREMQ03060 361 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 ZNHIT3Q15649 155 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-202ENST00000343090 SNAPC1Q16533 368 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 TMEM236Q5W0B7 351 aa7.9□□□□□ -1.14
UBE4B-202ENST00000343090 ZNF773Q6PK81 442 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms