RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 GALNT13Q8IUC8 556 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 PPA2Q9H2U2 334 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 RTTNQ86VV8 2226 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 ARGFXA6NJG6 315 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 E9PAM4 449 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 GNRHRP30968 328 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 HTD2P86397 168 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 ARL9Q6T311 187 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 GLB1L3Q8NCI6 653 aaPredicted RBP17.33■□□□□ 0.36
SMAD4-201ENST00000342988 OR7G2Q8NG99 324 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 AZIN2Q96A70 460 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 OSGEPQ9NPF4 335 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 BIN3Q9NQY0 253 aa17.33■□□□□ 0.36
SMAD4-201ENST00000342988 DUXAA6NLW8 204 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PKMP14618 531 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 RAB35Q15286 201 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 KRBOX4Q5JUW0 171 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ATAT1Q5SQI0 421 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PHTF2Q8N3S3 785 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TMEM125Q96AQ2 219 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 DNTTIP1Q9H147 329 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 NUFIP1Q9UHK0 495 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 CEP152O94986 1710 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 OR5H15A6NDH6 313 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 OR5H14A6NHG9 310 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 OR5H1A6NKK0 313 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ACTR1AP61163 376 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 MED27Q6P2C8 311 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ESX1Q8N693 406 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TNFRSF25Q93038 417 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 WNT8BQ93098 351 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 KCNJ13O60928 360 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TBRG1Q3YBR2 411 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SLC38A3Q99624 504 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ACTR6Q9GZN1 396 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 NINJ2Q9NZG7 142 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 DNAJC13O75165 2243 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 CAPN3P20807 821 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 GSTM3P21266 225 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 FIGNL1Q6PIW4 674 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TRIM74Q86UV6 250 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TRIM73Q86UV7 250 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SHKBP1Q8TBC3 707 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 VNN3Q9NY84 501 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SLC7A11Q9UPY5 501 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 MRPS23Q9Y3D9 190 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SFTPBP07988 381 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 EPHA3P29320 983 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 RBMXP38159 391 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 MOGSQ13724 837 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 KCTD19Q17RG1 926 aaPredicted RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 CCDC58Q4VC31 144 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 LRRC66Q68CR7 880 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 NATD1Q8N6N6 113 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 VRK1Q99986 396 aaPredicted RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 TET3O43151 1660 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 BAZ2AQ9UIF9 1905 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SIGLEC16A6NMB1 481 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 MLIPQ5VWP3 458 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 OGFOD2Q6N063 350 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 SLC27A1Q6PCB7 646 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 CNTD1Q8N815 330 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 FTHL17Q9BXU8 183 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 CTNNB1P35222 781 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PLP2Q04941 152 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 LDLRAP1Q5SW96 308 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 FAM151BQ6UXP7 276 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 UBE2J2Q8N2K1 259 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 FAM160A2Q8N612 972 aaPredicted RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ADAD1Q96M93 576 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 PNO1Q9NRX1 252 aaKnown RBP17.32■□□□□ 0.36
SMAD4-201ENST00000342988 BLOC1S4Q9NUP1 217 aa17.32■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF99A8MXY4 864 aaPredicted RBP17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ZMPSTE24O75844 475 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 IL3P08700 152 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 CLCN4P51793 760 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ERVK-19Q9WJR5 959 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 BLKP51451 505 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 IKBKEQ14164 716 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 KDELC1Q6UW63 502 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 TMEM110Q86TL2 294 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 TOR1AIP2Q8NFQ8 470 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SLC2A14Q8TDB8 520 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SCELO95171 688 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 GADD45GO95257 159 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 PPM1MQ96MI6 270 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 L2HGDHQ9H9P8 463 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ENDOUP21128 410 aaKnown RBP17.31■□□□□ 0.36
SMAD4-201ENST00000342988 GCNT1Q02742 428 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 NTRK2Q16620 822 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 KIAA0319Q5VV43 1072 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF606Q8WXB4 792 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms