RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MAPRE3Q9UPY8 281 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 V9GYH0 126 aa18.14■□□□□ 0.49
SMPD1-201ENST00000342245 A0A1W2PQ09 198 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 NFICP08651 508 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 SOX9P48436 509 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 NRIP1P48552 1158 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 RGS1Q08116 209 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 MAB21L1Q13394 359 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ARSKQ6UWY0 536 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 GPALPP1Q8IXQ4 340 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 CYP4Z2PQ8N1L4 340 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 FAM181AQ8N9Y4 354 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF599Q96NL3 588 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 MCCC1Q96RQ3 725 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-201ENST00000342245 CHCHD6Q9BRQ6 235 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 BEX2Q9BXY8 128 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 PAK6Q9NQU5 681 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-201ENST00000342245 PROM1O43490 865 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 KIAA0513O60268 411 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 WBP4O75554 376 aaKnown RBP18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ITGB6P18564 788 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 CCNCP24863 283 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 RPL34P49207 117 aaKnown RBP18.13■□□□□ 0.49
SMPD1-201ENST00000342245 SP4Q02446 784 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF33AQ06730 810 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 PON2Q15165 354 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ATF7IP2Q5U623 682 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 IER5Q5VY09 327 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 DET1Q7L5Y6 550 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 FAM126BQ8IXS8 530 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 CPXCR1Q8N123 301 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 RHEBL1Q8TAI7 183 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 PROKR1Q8TCW9 393 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ANKRD49Q8WVL7 239 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 ITCHQ96J02 903 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 DCLRE1CQ96SD1 692 aaKnown RBP18.13■□□□□ 0.49
SMPD1-201ENST00000342245 HDHD5Q9BXW7 423 aa18.13■□□□□ 0.49
SMPD1-201ENST00000342245 YDJCA8MPS7 323 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 AKR7A2O43488 359 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 CXCL8P10145 99 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 UROSP10746 265 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 CYP4B1P13584 511 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 HOXB8P17481 243 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ERCC2P18074 760 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 POU3F3P20264 500 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-201ENST00000342245 DAPP51397 102 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 LEXMQ3ZCV2 418 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 LAMTOR1Q6IAA8 161 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 LINC00518Q8N0U6 118 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 GDPD1Q8N9F7 314 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 OR8H1Q8NGG4 311 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 C9orf43Q8TAL5 461 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-201ENST00000342245 KCNS3Q9BQ31 491 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ASB7Q9H672 318 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 MUTYHQ9UIF7 546 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ELF5Q9UKW6 265 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-201ENST00000342245 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 STX16O14662 325 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 GRK5P34947 590 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 MAGEA2P43356 314 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 TEKQ02763 1124 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 IRF3Q14653 427 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 EIF4HQ15056 248 aaKnown RBP18.12■□□□□ 0.49
SMPD1-201ENST00000342245 GPR19Q15760 415 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 BAK1Q16611 211 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ARHGAP17Q68EM7 881 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF367Q7RTV3 350 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 SNX20Q7Z614 316 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 CHPFQ8IZ52 775 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ENKURQ8TC29 256 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 PYURFQ96I23 114 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 KCNA7Q96RP8 456 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 WASH6PQ9NQA3 447 aa18.12■□□□□ 0.49
SMPD1-201ENST00000342245 ARPC4-TTLL3A0A0A6YYG9 625 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-201ENST00000342245 NCF1P14598 390 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-201ENST00000342245 KCNC1P48547 511 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 OSTNP61366 133 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 RBP5P82980 135 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 IL1RL1Q01638 556 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 MRPL28Q13084 256 aaKnown RBP18.11■□□□□ 0.49
SMPD1-201ENST00000342245 TARBP2Q15633 366 aaKnown RBP18.11■□□□□ 0.49
SMPD1-201ENST00000342245 TAB1Q15750 504 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 TSGA13Q96PP4 275 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 BBS2Q9BXC9 721 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 SPNS1Q9H2V7 528 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 AASSQ9UDR5 926 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 U3KQV3 271 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 KIAA1217Q5T5P2 1943 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 APBA3O96018 575 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 ALAS2P22557 587 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 DNAJA1P31689 397 aaKnown RBP18.11■□□□□ 0.49
SMPD1-201ENST00000342245 CPT1AP50416 773 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 CYP4F3Q08477 520 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 GPR158Q5T848 1215 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 HEBP1Q9NRV9 189 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms