RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 HIST1H2AGP0C0S8 130 aaPredicted RBP7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 HIST1H2ADP20671 130 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC6A2P23975 617 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 TACR1P25103 407 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC6A12P48065 614 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 PRLHRP49683 370 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 RCAN2Q14206 197 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF658BQ4V348 819 aaPredicted RBP7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 C6orf10Q5SRN2 563 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 LDLRAP1Q5SW96 308 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 PLEKHS1Q5SXH7 462 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 TLDC1Q6P9B6 456 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 CYP20A1Q6UW02 462 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 MCOLN3Q8TDD5 553 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 GFM2Q969S9 779 aaKnown RBP7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 LRRC58Q96CX6 371 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 HIST1H2AHQ96KK5 128 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 VPS35Q96QK1 796 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 MTERF1Q99551 399 aaKnown RBP7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 HIST1H2AJQ99878 128 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 MYOCQ99972 504 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 GPATCH1Q9BRR8 931 aaKnown RBP7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 CCM2Q9BSQ5 444 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 H2AFJQ9BTM1 129 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 BRINP2Q9C0B6 783 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 DYRK4Q9NR20 520 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 DZANK1Q9NVP4 752 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 TMEM181Q9P2C4 612 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 DLGAP4Q9Y2H0 992 aa7.21□□□□□ -1.26
SRFBP1-201ENST00000339397 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 E7EQ34 232 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 H3BQ06 376 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ANGPT2O15123 496 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 NVLO15381 856 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ABCB7O75027 752 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ATG13O75143 517 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 POP7O75817 140 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CLDN9O95484 217 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 C8GP07360 202 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CD72P21854 359 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 RPL10P27635 214 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 MAT2AP31153 395 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 VHLP40337 213 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 GRIA2P42262 883 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ATP4BP51164 291 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 POLR2JP52435 117 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 KIAA0040Q15053 153 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 TLR1Q15399 786 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ZRSR2Q15696 482 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 WSCD2Q2TBF2 565 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SYTL3Q4VX76 610 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 AGBL4Q5VU57 503 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 C11orf96Q7Z7L8 435 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SPATA24Q86W54 205 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 RALGPS2Q86X27 583 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 HCAR2Q8TDS4 363 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 NAF1Q96HR8 494 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PKP4Q99569 1192 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 LMAN2LQ9H0V9 348 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 COPS7BQ9H9Q2 264 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SPAG4Q9NPE6 437 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 FZD3Q9NPG1 666 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PLAGL1Q9UM63 463 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 A0A1W2PP18 115 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 VGLL3A8MV65 326 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 H0Y858 1186 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PSIP1O75475 530 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 RNASEH2AO75792 299 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 BCAS2O75934 225 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 FTH1P02794 183 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 EBLN1P0CF75 366 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 IMPA1P29218 277 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 HALP42357 657 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 KIR2DL1P43626 348 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PHC1P78364 1004 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 MEF2AQ02078 507 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 TFF2Q03403 129 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CHIT1Q13231 466 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 PRKG2Q13237 762 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 DDX39BQ13838 428 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SELPLGQ14242 412 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 TRIM25Q14258 630 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 INPP5AQ14642 412 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CST6Q15828 149 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 GSTA3Q16772 222 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 MUM1Q2TAK8 710 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 ITPRIPL2Q3MIP1 535 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SFT2D3Q587I9 215 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 CES5AQ6NT32 575 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 AGTRAPQ6RW13 159 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 DHDDSQ86SQ9 333 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 HEATR4Q86WZ0 1026 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 RASGRP3Q8IV61 690 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 LIX1Q8N485 282 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 HDDC3Q8N4P3 179 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 UBTD2Q8WUN7 234 aa7.2□□□□□ -1.26
SRFBP1-201ENST00000339397 SELENOMQ8WWX9 145 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms