RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 UQCRFS1P47985 274 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 CD97P48960 835 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 LDB1Q86U70 411 aaPredicted RBP18.75■□□□□ 0.59
ITGA4-202ENST00000339307 TAX1BP1Q86VP1 789 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 PPHLN1Q8NEY8 458 aaKnown RBP18.75■□□□□ 0.59
ITGA4-202ENST00000339307 ZNF778Q96MU6 729 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 C17orf62Q9BQA9 187 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 NDC1Q9BTX1 674 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 NUDT9Q9BW91 350 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 GPR83Q9NYM4 423 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.75■□□□□ 0.59
ITGA4-202ENST00000339307 DHCR7Q9UBM7 475 aaKnown RBP18.75■□□□□ 0.59
ITGA4-202ENST00000339307 KLHL20Q9Y2M5 609 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 PEX12O00623 359 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 ZSCAN9O15535 394 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 DPM1O60762 260 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 ALAS2P22557 587 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 CCR7P32248 378 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 DCDP81605 110 aaKnown RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 SLC13A5Q86YT5 568 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 RNF10Q8N5U6 811 aaKnown RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 GSDMBQ8TAX9 411 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 SKA2Q8WVK7 121 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 ASZ1Q8WWH4 475 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 DHRS4Q9BTZ2 278 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 FRMD8P1Q9BZ68 369 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 LRRC4CQ9HCJ2 640 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 MLXIPLQ9NP71 852 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 SUN1O94901 812 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 RPN2P04844 631 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 APOA4P06727 396 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 CTSBP07858 339 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 PSMA3P25788 255 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 SESN2P58004 480 aaPredicted RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 SEMA3AQ14563 771 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 KIR2DS3Q14952 304 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 OASLQ15646 514 aaKnown RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 NLRP9Q7RTR0 991 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 KRT222Q8N1A0 295 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 OTUD6BQ8N6M0 293 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 LMNTD1Q8N9Z9 388 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
ITGA4-202ENST00000339307 RANBP9Q96S59 729 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 AP1M1Q9BXS5 423 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 TSGA10Q9BZW7 698 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 CATSPERZQ9NTU4 200 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 PLCL2Q9UPR0 1127 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 CDYLQ9Y232 598 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 TCAF1Q9Y4C2 921 aa18.74■□□□□ 0.59
ITGA4-202ENST00000339307 MED13Q9UHV7 2174 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 BLACEA4D250 179 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 AGFG2O95081 481 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 ZSCAN5DPP0CG00 497 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 SSPNQ14714 243 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 TMED2Q15363 201 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 SLC5A12Q1EHB4 618 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 AARS2Q5JTZ9 985 aaKnown RBP18.73■□□□□ 0.59
ITGA4-202ENST00000339307 PTRHD1Q6GMV3 140 aaKnown RBP18.73■□□□□ 0.59
ITGA4-202ENST00000339307 RHBDD2Q6NTF9 364 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 JMJD6Q6NYC1 403 aaPredicted RBP18.73■□□□□ 0.59
ITGA4-202ENST00000339307 TLDC1Q6P9B6 456 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 ZNF534Q76KX8 674 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 GSTA5Q7RTV2 222 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 VRK3Q8IV63 474 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 SLC22A15Q8IZD6 547 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 CLEC1AQ8NC01 280 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 IL17FQ96PD4 163 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 CASS4Q9NQ75 786 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 CHRAC1Q9NRG0 131 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 PAK5Q9P286 719 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 SLC39A10Q9ULF5 831 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 SRPK3Q9UPE1 567 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 PCDHGB7Q9Y5F8 929 aa18.73■□□□□ 0.59
ITGA4-202ENST00000339307 COL12A1Q99715 3063 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 KRT86O43790 486 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 KLF7O75840 302 aaPredicted RBP18.72■□□□□ 0.59
ITGA4-202ENST00000339307 CEACAM4O75871 244 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 MAGP20916 626 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 PEBP1P30086 187 aaKnown RBP18.72■□□□□ 0.59
ITGA4-202ENST00000339307 RAB28P51157 221 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 RPS6KA1Q15418 735 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 INPP5JQ15735 1006 aaPredicted RBP18.72■□□□□ 0.59
ITGA4-202ENST00000339307 FHL5Q5TD97 284 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 PAPD7Q5XG87 772 aaKnown RBP18.72■□□□□ 0.59
ITGA4-202ENST00000339307 ZNF385CQ66K41 422 aaPredicted RBP18.72■□□□□ 0.59
ITGA4-202ENST00000339307 TTC23LQ6PF05 361 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 DNAJC22Q8N4W6 341 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 GALNT11Q8NCW6 608 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 FLVCR1-AS1Q8TAF5 88 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 PROKR1Q8TCW9 393 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 LKAAEAR1Q8TD35 194 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 FER1L6-AS2Q96M78 137 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 GBP5Q96PP8 586 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
ITGA4-202ENST00000339307 CD63P08962 238 aa18.71■□□□□ 0.59
ITGA4-202ENST00000339307 GP1BBP13224 206 aa18.71■□□□□ 0.59
ITGA4-202ENST00000339307 CD9P21926 228 aa18.71■□□□□ 0.59
ITGA4-202ENST00000339307 PKLRP30613 574 aa18.71■□□□□ 0.59
ITGA4-202ENST00000339307 GABRA4P48169 554 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms