RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TMED5Q9Y3A6 229 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 TTC24A2A3L6 582 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDLIM1O00151 329 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 WNT9AO14904 365 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 TFECO14948 347 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PRKD3O94806 890 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 VIPP01282 170 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC35G6P0C7Q6 338 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 MYCLP1P12525 358 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ALDH4A1P30038 563 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ATP4BP51164 291 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 CHRNA6Q15825 494 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PARGQ86W56 976 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 CYTH4Q9UIA0 394 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 RWDD3Q9Y3V2 267 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF24P17028 368 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PIK3CBP42338 1070 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 DGKQP52824 942 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 DMPKQ09013 629 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PSRC1Q6PGN9 363 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 TXNDC5Q8NBS9 432 aaKnown RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 SH3RF2Q8TEC5 729 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 GTPBP3Q969Y2 492 aaKnown RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 IRAK3Q9Y616 596 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR5F1O95221 314 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ALPIP09923 528 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 SDC2P34741 201 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 YAP1P46937 504 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CCT3P49368 545 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 SEPHS1P49903 392 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 HSPB3Q12988 150 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 LIN54Q6MZP7 749 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 GPR153Q6NV75 609 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 HTRA1Q92743 480 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDLIM7Q9NR12 457 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 FLRT1Q9NZU1 646 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 MAN2B2Q9Y2E5 1009 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 A0A1W2PRB8 838 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ECDO95905 644 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 EFNA1P20827 205 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 HSD17B2P37059 387 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 EMX2Q04743 252 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 GDPD4Q6W3E5 623 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 TPRG1Q6ZUI0 275 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR4F6Q8NGB9 312 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PIGXQ8TBF5 258 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 BRINP2Q9C0B6 783 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 KCTD3Q9Y597 815 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 N6AMT1Q9Y5N5 214 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ARVCFO00192 962 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 KDELR3O43731 214 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 SSNA1O43805 119 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 DNAJA1P31689 397 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 STXBP1P61764 594 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CYP4F8P98187 520 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ABHD18Q0P651 414 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CCDC157Q569K6 752 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF678Q5SXM1 525 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDE12Q6L8Q7 609 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ADGRG6Q86SQ4 1221 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 AMZ2Q86W34 360 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 UMODL1-AS1Q8N2C9 162 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 DCAF4L2Q8NA75 395 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM98AQ8NCA5 519 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 EZH1Q92800 747 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 COQ7Q99807 217 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 MRTO4Q9UKD2 239 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 STON1Q9Y6Q2 735 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 DCLK1O15075 740 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDPK1O15530 556 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CNTN5O94779 1100 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CYP11A1P05108 521 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 SCN1BQ07699 218 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 SCAPQ12770 1279 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 HPS1Q92902 700 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMBIM1Q969X1 311 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 DIRAS2Q96HU8 199 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZSCAN5AQ9BUG6 496 aa16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 RSPH9Q9H1X1 276 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 THUMPD1Q9NXG2 353 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-201ENST00000334690 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 PRKCGP05129 697 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 PGRP06401 933 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 TUBA4AP68366 448 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 OAFQ86UD1 273 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR14C36Q8NHC7 312 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 TRNAU1APQ9NX07 287 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 PRORSD1PA6NEY8 169 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC22A1O15245 554 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 AP2A2O94973 939 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 RPLP0P05388 317 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 MVKQ03426 396 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 ILF3Q12906 894 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR2T5Q6IEZ7 315 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms