RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 MAPK10P53779 464 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 NTHL1P78549 312 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 CBX2Q14781 532 aaPredicted RBP18.47■□□□□ 0.55
RFTN1-201ENST00000334133 TEAD2Q15562 447 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 CARD16Q5EG05 197 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 ZNF697Q5TEC3 545 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 RIMKLAQ8IXN7 391 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 PACRGLQ8N7B6 248 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 APIPQ96GX9 242 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 APOLD1Q96LR9 279 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 NTMT1Q9BV86 223 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 SLC32A1Q9H598 525 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 ASAH2Q9NR71 780 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 PCDHB14Q9Y5E9 798 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 CDH1P12830 882 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 HALP42357 657 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 CDKN2CP42773 168 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 SPINT3P49223 89 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 CHRNB3Q05901 458 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 USP39Q53GS9 565 aaKnown RBP18.47■□□□□ 0.55
RFTN1-201ENST00000334133 IRAK1BP1Q5VVH5 260 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 LYPLAL1Q5VWZ2 237 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 HSD11B1LQ7Z5J1 315 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 GALNT10Q86SR1 603 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
RFTN1-201ENST00000334133 LMNTD1Q8N9Z9 388 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 BPIFB1Q8TDL5 484 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 FAM162AQ96A26 154 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 MUS81Q96NY9 551 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 BDH2Q9BUT1 245 aa18.47■□□□□ 0.55
RFTN1-201ENST00000334133 UPK1AO00322 258 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 IFRD1O00458 451 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 PRKD3O94806 890 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 OR56A5P0C7T3 313 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 UMPSP11172 480 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 PRKACGP22612 351 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 CSNK1DP48730 415 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ABRQ12979 859 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 RBBP5Q15291 538 aaKnown RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 TMEM215Q68D42 235 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 TRIM46Q7Z4K8 759 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 CLVS1Q8IUQ0 354 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 CBARPQ8N350 705 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 PAPD5Q8NDF8 572 aaKnown RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 OSCP1Q8WVF1 389 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ECHDC3Q96DC8 303 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ZBP1Q9H171 429 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 MUC13Q9H3R2 512 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 EBF1Q9UH73 591 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 SLC25A13Q9UJS0 675 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 HS3ST2Q9Y278 367 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 AGAP14A8MT82 685 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 TTC34A8MYJ7 566 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 HIST1H2AGP0C0S8 130 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 HIST1H2ADP20671 130 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 AOAHP28039 575 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 CAPGP40121 348 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ERVFC1P60507 584 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ARHGEF6Q15052 776 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 ELMO1Q92556 727 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 HIST1H2AHQ96KK5 128 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 LMLNQ96KR4 655 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 HIST1H2AJQ99878 128 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 H2AFJQ9BTM1 129 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 GPRC5BQ9NZH0 403 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 RSL24D1Q9UHA3 163 aaKnown RBP18.46■□□□□ 0.55
RFTN1-201ENST00000334133 TRPS1Q9UHF7 1281 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 PADI4Q9UM07 663 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 CDC14AQ9UNH5 594 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 WNT6Q9Y6F9 365 aa18.46■□□□□ 0.55
RFTN1-201ENST00000334133 NPPAP01160 153 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 KRT6AP02538 564 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 KRT6BP04259 564 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 TYRP14679 529 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ALDH3B2P48448 385 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 KRT6CP48668 564 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 RPS14P62263 151 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 FAM98BQ52LJ0 330 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 MPP7Q5T2T1 576 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PLPP4Q5VZY2 271 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ADNP2Q6IQ32 1131 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 GOLM1Q8NBJ4 401 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ZNF548Q8NEK5 533 aaPredicted RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 OR2A12Q8NGT7 310 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 USP7Q93009 1102 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 DCUN1D5Q9BTE7 237 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 CLMPQ9H6B4 373 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 POP4O95707 220 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PABPC1P11940 636 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 CTBSQ01459 385 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 LY6G5CQ5SRR4 150 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 LYSMD1Q96S90 227 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PPT2Q9UMR5 302 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PCDHGA11Q9Y5H2 935 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PLXNB3Q9ULL4 1909 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 ABHD14A-ACY1A0A1B0GW23 586 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 H0Y858 1186 aa18.45■□□□□ 0.54
RFTN1-201ENST00000334133 TRMUO75648 421 aaKnown RBP18.45■□□□□ 0.54
RFTN1-201ENST00000334133 PARNO95453 639 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms