RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 DPP3Q9NY33 737 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
SKA2-201ENST00000330137 CLCA1A8K7I4 914 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SSX4O60224 188 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 KPNA6O60684 536 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 HCN1O60741 890 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 RFPL3O75679 317 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 PRKCBP05771 671 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 HMBSP08397 361 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 RPS17P08708 135 aaKnown RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 GLULP15104 373 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ALAS2P22557 587 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SUOXP51687 545 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SMARCB1Q12824 385 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 CTBP1Q13363 440 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GALEQ14376 348 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 IRF3Q14653 427 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 BTBD16Q32M84 506 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ATP6AP1LQ52LC2 224 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SDE2Q6IQ49 451 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 CCDC149Q6ZUS6 474 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 DENND6AQ8IWF6 608 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 PROKR1Q8TCW9 393 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 PYURFQ96I23 114 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ACOX2Q99424 681 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ZC4H2Q9NQZ6 224 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ZNF302Q9NR11 478 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 MYO18AQ92614 2054 aaKnown RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 EFCAB10A6NFE3 127 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 OR5K4A6NMS3 321 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 CXCR6O00574 342 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 WBP4O75554 376 aaKnown RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 ARSAP15289 507 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 FOSL1P15407 271 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ATF4P18848 351 aaPredicted RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 MAGP20916 626 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 APLP1P51693 650 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 CLCN3P51790 818 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GEMP55040 296 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 PER3P56645 1201 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 MGAT3Q09327 533 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GPR19Q15760 415 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SEZ6Q53EL9 994 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 KLHL12Q53G59 568 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SETMARQ53H47 684 aaPredicted RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 ALFQ53S48 1182 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 HECTD2Q5U5R9 776 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 LAMTOR1Q6IAA8 161 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ARHGAP36Q6ZRI8 547 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 RNF165Q6ZSG1 346 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 CYP4Z1Q86W10 505 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SCUBE3Q8IX30 993 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GHDCQ8N2G8 530 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 KCT2Q8NC54 265 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 GLB1L3Q8NCI6 653 aaPredicted RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 ACER1Q8TDN7 264 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 FAM162AQ96A26 154 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 RADILQ96JH8 1075 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 OR51B5Q9H339 312 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 IFT22Q9H7X7 185 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ERVK13-1Q9NX77 482 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 SPASTQ9UBP0 616 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 SAMD4AQ9UPU9 718 aaKnown RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 TNFSF13BQ9Y275 285 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 ZNF175Q9Y473 711 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 KLF2Q9Y5W3 355 aaPredicted RBP8.21□□□□□ -1.1
SKA2-201ENST00000330137 STON1Q9Y6Q2 735 aa8.21□□□□□ -1.1
SKA2-201ENST00000330137 F5H423 210 aaPredicted RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 KCNJ13O60928 360 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ZNF623O75123 536 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 SLC43A1O75387 559 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ERN1O75460 977 aaKnown RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 TNNI3P19429 210 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 F8A1P23610 371 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 RORCP51449 518 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 BCAT1P54687 386 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DIO3P55073 304 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 UFM1P61960 85 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DSC3Q14574 896 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 PON2Q15165 354 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 GRK1Q15835 563 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DOK7Q18PE1 504 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 GLYR1Q49A26 553 aaPredicted RBP8.2□□□□□ -1.1
SKA2-201ENST00000330137 STRIP1Q5VSL9 837 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 LAIR1Q6GTX8 287 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 MZT2BQ6NZ67 158 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TMEM65Q6PI78 240 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 BRAT1Q6PJG6 821 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ENPP6Q6UWR7 440 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 ARSKQ6UWY0 536 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 TRIM69Q86WT6 500 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
SKA2-201ENST00000330137 OR7G3Q8NG95 312 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms