RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 DPAGT1Q9H3H5 408 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 TMEM27Q9HBJ8 222 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PRDM8Q9NQV8 689 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PCDHAC2Q9Y5I4 1007 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.77□□□□□ -1.17
CIITA-201ENST00000324288 A0A0G2JN53 185 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 C22orf31O95567 290 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 AXLP30530 894 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 AVPR1BP47901 424 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ZCCHC12Q6PEW1 402 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 POGLUT1Q8NBL1 392 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PER2O15055 1255 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 GABRR2P28476 465 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ADAM15Q13444 863 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 DAG1Q14118 895 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MSANTD2Q6P1R3 559 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 IQCHQ86VS3 1027 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MPP5Q8N3R9 675 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 OR5B17Q8NGF7 314 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 JOSD2Q8TAC2 188 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PCDH18Q9HCL0 1135 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 C14orf105Q9NVL8 296 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MBD5Q9P267 1494 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MYO5BQ9ULV0 1848 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MAGEA6P43360 314 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ENTPD1P49961 510 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 RPP38P78345 283 aaKnown RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 SLC13A2Q13183 592 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 TGFBIQ15582 683 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 SPIN3Q5JUX0 258 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 NCCRP1Q6ZVX7 275 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 FIBCD1Q8N539 461 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 HTATIP2Q9BUP3 242 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PCDHGC3Q9UN70 934 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ADGRB3O60242 1522 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 SLC33A1O00400 549 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 PIP5K1BO14986 540 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 CHST10O43529 356 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 RGS8P57771 180 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 ADAM8P78325 824 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 SLC9B1Q4ZJI4 515 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ZBTB2Q8N680 514 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 OR5M3Q8NGP4 307 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 CASTOR1Q8WTX7 329 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 YIPF4Q9BSR8 244 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 TCF7L1Q9HCS4 588 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ENAMQ9NRM1 1142 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PNPLA6Q8IY17 1366 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ACOX3O15254 700 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ITM2AO43736 263 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 CXCL14O95715 111 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 RPS3AP61247 264 aaKnown RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 ARSJQ5FYB0 599 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 RNF157Q96PX1 679 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ATPIF1Q9UII2 106 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 RAI2Q9Y5P3 530 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 SRRM3A6NNA2 597 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 TGFB3P10600 412 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 PTX3P26022 381 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 DRG2P55039 364 aaKnown RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 ATP6V0D1P61421 351 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 FAM174BQ3ZCQ3 159 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 TNFAIP8L2Q6P589 184 aaPredicted RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 LRRN1Q6UXK5 716 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 IQCKQ8N0W5 287 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 SIDT2Q8NBJ9 832 aaKnown RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 IL31RAQ8NI17 732 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 FBXL20Q96IG2 436 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 AGAP2Q99490 1192 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ACO2Q99798 780 aaKnown RBP7.77□□□□□ -1.17
CIITA-201ENST00000324288 RHOJQ9H4E5 214 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 ASTN1O14525 1302 aa7.77□□□□□ -1.17
CIITA-201ENST00000324288 C2orf92A0A1B0GVN3 265 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 ZNF705EA8MWA4 302 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 C2orf74A8MZ97 194 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PRKACAP17612 351 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 EIF4BP23588 611 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 GNPDA1P46926 289 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 AFF1P51825 1210 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 IL17AQ16552 155 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC8B1Q6J4K2 584 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CCDC28AQ8IWP9 274 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC7A5P1Q8MH63 180 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SOCS4Q8WXH5 440 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 POLR2J3Q9H1A7 115 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 LRRC19Q9H756 370 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PNO1Q9NRX1 252 aaKnown RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
CIITA-201ENST00000324288 ATG13O75143 517 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CABYRO75952 493 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 PRDX6P30041 224 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 TIE1P35590 1138 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SFT2D3Q587I9 215 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 LRRC69Q6ZNQ3 347 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 QSOX2Q6ZRP7 698 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SSX6Q7RTT6 188 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 COMMD7Q86VX2 200 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 CPNE8Q86YQ8 564 aa7.76□□□□□ -1.17
CIITA-201ENST00000324288 SLC22A15Q8IZD6 547 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms