RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CXXC1Q9P0U4 656 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-201ENST00000322507 RFXANKO14593 260 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MINDY4Q4G0A6 757 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RPL13AP3Q6NVV1 102 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF570Q96NI8 536 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RNF157Q96PX1 679 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 TBC1D10AQ9BXI6 508 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR10H1Q9Y4A9 318 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 LACTBL1A8MY62 500 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 KRBOX1C9JBD0 128 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ATG13O75143 517 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RIOX2Q8IUF8 465 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 IRGQQ8WZA9 623 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ACSF2Q96CM8 615 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SLC47A1Q96FL8 570 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 BTBD2Q9BX70 525 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MTFR1LQ9H019 292 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MED16Q9Y2X0 877 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 AGAP5A6NIR3 686 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 E5RJQ4 531 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF286BP0CG31 522 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 NR2C1P13056 603 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 IGFALSP35858 605 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RPL23AP62750 156 aaKnown RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SLC25A52Q3SY17 297 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 GPC2Q8N158 579 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 KLHL15Q96M94 604 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 PRICKLE1Q96MT3 831 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 IGSF9Q9P2J2 1179 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 N6AMT1Q9Y5N5 214 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 CTSEP14091 401 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MATN1P21941 496 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 BTG3Q14201 252 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 C1orf186Q6ZWK4 172 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 C7orf26Q96N11 449 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 PCDHGB1Q9Y5G3 927 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 PAK4O96013 591 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 HSD17B2P37059 387 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 C14orf28Q4W4Y0 310 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR4L1Q8NH43 312 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR51E2Q9H255 320 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 TCRBV5S4A2TA0A5A2 114 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR10H3O60404 316 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 LYPLA2O95372 231 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SLC35G4P0C7Q5 338 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MVKQ03426 396 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 TIGD2Q4W5G0 525 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 CNKSR3Q6P9H4 555 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 DCLRE1AQ6PJP8 1040 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 DEFB106AQ8N104 65 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 NPRL2Q8WTW4 380 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 IPCEF1Q8WWN9 437 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 POP1Q99575 1024 aaKnown RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 TMLHEQ9NVH6 421 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 TXNL1O43396 289 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SNCGO76070 127 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 GLRA2P23416 452 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 UBAP2Q5T6F2 1119 aaKnown RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SMARCD3Q6STE5 483 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MOB2Q70IA6 237 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF347Q96SE7 839 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 AGAP2Q99490 1192 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SPATA9Q9BWV2 254 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 C1orf109Q9NX04 203 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 KLQ9UEF7 1012 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ZNF207O43670 478 aaKnown RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ENSAO43768 121 aaKnown RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 BEST1O76090 585 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 KAT7O95251 611 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OXSR1O95747 527 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SDR16C5Q8N3Y7 309 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 CASTOR2A6NHX0 329 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 CD86P42081 329 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 ZFPM1Q8IX07 1006 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 KAT2BQ92831 832 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RSPRY1Q96DX4 576 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR52E6Q96RD3 313 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 IFT27Q9BW83 186 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 OR11A1Q9GZK7 315 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 FBXO10Q9UK96 956 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 HEBP2Q9Y5Z4 205 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 CAPN8A6NHC0 703 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 EPORP19235 508 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 HNF1BP35680 557 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 RFC3P40938 356 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 PSEN2P49810 448 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 NIPAL4Q0D2K0 466 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SHC3Q92529 594 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 SEMA6AQ9H2E6 1030 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 MYNNQ9NPC7 610 aa9.56□□□□□ -0.88
COL12A1-201ENST00000322507 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 CLDN11O75508 207 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 RECQL4O94761 1208 aa9.55□□□□□ -0.88
COL12A1-201ENST00000322507 DNAJB1P25685 340 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms