RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 C14orf119Q9NWQ9 140 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 COL20A1Q9P218 1284 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PLEKHA6Q9Y2H5 1048 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CPQQ9Y646 472 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ADAMTSL1Q8N6G6 1762 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC9A3R1O14745 358 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CHP2O43745 196 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 OR56A5P0C7T3 313 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 T-ENOLP0DO92 83 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CHMP24386 653 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 UQCRC1P31930 480 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 DPY19L1Q2PZI1 675 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 HECTD2Q5U5R9 776 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 BAIAP2L2Q6UXY1 529 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF730Q6ZMV8 503 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF615Q8N8J6 731 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC13A3Q8WWT9 602 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 AZIN2Q96A70 460 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 WACQ9BTA9 647 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MAGIXQ9H6Y5 334 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 DDX4Q9NQI0 724 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MS4A12Q9NXJ0 267 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 NUDT4Q9NZJ9 180 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 LSM7Q9UK45 103 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SPATA31A3Q5VYP0 1347 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TP73O15350 636 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZBTB14O43829 449 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 IFNGP01579 166 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CCNYL3P0C7X3 344 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CFL1P23528 166 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 HTR7P34969 479 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 DSC3Q14574 896 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF484Q5JVG2 852 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 DCST1Q5T197 706 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 HACD2Q6Y1H2 254 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GEMIN6Q8WXD5 167 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PEX13Q92968 403 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 HCN3Q9P1Z3 774 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SEC14L3Q9UDX4 400 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PRKAG2Q9UGJ0 569 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ENTPD4Q9Y227 616 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 hCG_2039718K7EN88 272 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 AQP9O43315 295 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RPN2P04844 631 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ACADLP28330 430 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CLK2P49760 499 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NDST2P52849 883 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MEP1AQ16819 746 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MSS51Q4VC12 460 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RC3H2Q9HBD1 1191 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FAM118AQ9NWS6 357 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ERVK13-1Q9NX77 482 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHGB3Q9Y5G1 929 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NOX1Q9Y5S8 564 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 DISC1C4P0D8 188 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MUSKO15146 869 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SEMA5AQ13591 1074 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 RAB12Q6IQ22 244 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PAMR1Q6UXH9 720 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ZC3H3Q8IXZ2 948 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MUS81Q96NY9 551 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TSNAXQ99598 290 aaKnown RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ACSS2Q9NR19 701 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 LACTBL1A8MY62 500 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 E9PAM4 449 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TSTD3H0UI37 97 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 AP1G1O43747 822 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ALX3O95076 343 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PAHP00439 452 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 APOC1P02654 83 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF3P17036 446 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 KLRK1P26718 216 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 HTR2AP28223 471 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 EVI2BP34910 448 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 BUD31P41223 144 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 XKP51811 444 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 TFAP2DQ7Z6R9 452 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CFAP206Q8IYR0 622 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 GDPD1Q8N9F7 314 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 SH3YL1Q96HL8 342 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ART5Q96L15 291 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FAM129BQ96TA1 746 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MAGEB17A8MXT2 336 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CLIC3O95833 236 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CD2P06729 351 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 ANXA5P08758 320 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NTSP30990 170 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NUDT1P36639 197 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 MTAPQ13126 283 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 NAPRTQ6XQN6 538 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 FSTL5Q8N475 847 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
SMC1A-201ENST00000322213 PYURFQ96I23 114 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms