RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DMPKQ09013 629 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 TBL3Q12788 808 aaKnown RBP17.37■□□□□ 0.37
RAB39A-201ENST00000320578 INPP5AQ14642 412 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 ABRAXAS2Q15018 415 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 TCHHL1Q5QJ38 904 aaPredicted RBP17.37■□□□□ 0.37
RAB39A-201ENST00000320578 FAM219BQ5XKK7 198 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 PAOXQ6QHF9 649 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 FBXW8Q8N3Y1 598 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 DCBLD1Q8N8Z6 715 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 PKP4Q99569 1192 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 OR52A5Q9H2C5 316 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 GPRC5BQ9NZH0 403 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 SLC22A14Q9Y267 594 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 TMEM98Q9Y2Y6 226 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 NDUFAF1Q9Y375 327 aa17.37■□□□□ 0.37
RAB39A-201ENST00000320578 DYTNA2CJ06 578 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 SHISA7A6NL88 538 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 PAK4O96013 591 aaPredicted RBP17.36■□□□□ 0.37
RAB39A-201ENST00000320578 MYCLP1P12525 358 aaPredicted RBP17.36■□□□□ 0.37
RAB39A-201ENST00000320578 PRPH2P23942 346 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 CCINQ13939 588 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 LRP8Q14114 963 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 E2F2Q14209 437 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 CACUL1Q86Y37 369 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 ENDOVQ8N8Q3 282 aaKnown RBP17.36■□□□□ 0.37
RAB39A-201ENST00000320578 ROPN1LQ96C74 230 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 ITM2CQ9NQX7 267 aa17.36■□□□□ 0.37
RAB39A-201ENST00000320578 IMPA1P29218 277 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 CASP2P42575 452 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ACTR3P61158 418 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 METRNLQ641Q3 311 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 BLOC1S3Q6QNY0 202 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 CRTC3Q6UUV7 619 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 PDZD3Q86UT5 571 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 THOC6Q86W42 341 aaKnown RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 FNDC5Q8NAU1 212 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 PCYOX1LQ8NBM8 494 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 DENND6BQ8NEG7 585 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 OR9A1PQ8NGU1 263 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 FAM3CQ92520 227 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 MRGPRX1Q96LB2 322 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 LGR4Q9BXB1 951 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 DCLRE1BQ9H816 532 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 WDR41Q9HAD4 459 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 RNPEPL1Q9HAU8 725 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 MRPL40Q9NQ50 206 aaKnown RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 NOP53Q9NZM5 478 aaKnown RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 FAM8A1Q9UBU6 413 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 KLQ9UEF7 1012 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 GIMAP2Q9UG22 337 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 MMP17Q9ULZ9 603 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ANKRD12Q6UB98 2062 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 F5P12259 2224 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 FBP2O00757 339 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 SRFP11831 508 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 JUPP14923 745 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 BDKRB1P46663 353 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 DIO3P55073 304 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 NFE2L1Q14494 772 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 KPNB1Q14974 876 aaKnown RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 NR6A1Q15406 480 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 SMAD2Q15796 467 aaKnown RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 AP5B1Q2VPB7 878 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 MMEL1Q495T6 779 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 REP15Q6BDI9 236 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 SCIMPQ6UWF3 145 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 BNC2Q6ZN30 1099 aaPredicted RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 WDR60Q8WVS4 1066 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 FOXJ1Q92949 421 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 TIMM29Q9BSF4 260 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ZDHHC5Q9C0B5 715 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ATG10Q9H0Y0 220 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ACSL5Q9ULC5 683 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 ZNF490Q9ULM2 529 aaPredicted RBP17.35■□□□□ 0.37
RAB39A-201ENST00000320578 SLC17A4Q9Y2C5 497 aa17.35■□□□□ 0.37
RAB39A-201ENST00000320578 IFRD1O00458 451 aaPredicted RBP17.34■□□□□ 0.37
RAB39A-201ENST00000320578 MAN2B1O00754 1011 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 SLC16A8O95907 504 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 RPN2P04844 631 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 ACADMP11310 421 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 ACPPP15309 386 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 HNF4AP41235 474 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 GNPDA1P46926 289 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 NAE1Q13564 534 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 C8orf82Q6P1X6 216 aaPredicted RBP17.34■□□□□ 0.37
RAB39A-201ENST00000320578 TRIM69Q86WT6 500 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 OR9I1Q8NGQ6 314 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 PYCR2Q96C36 320 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 SCARF2Q96GP6 870 aaPredicted RBP17.34■□□□□ 0.37
RAB39A-201ENST00000320578 CLPTM1LQ96KA5 538 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 SLC52A3Q9NQ40 469 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 BRWD1Q9NSI6 2320 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 INTS7Q9NVH2 962 aaKnown RBP17.34■□□□□ 0.37
RAB39A-201ENST00000320578 REV3LO60673 3130 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 TRPM6Q9BX84 2022 aa17.34■□□□□ 0.37
RAB39A-201ENST00000320578 TBC1D3DA0A087WVF3 549 aa17.33■□□□□ 0.37
RAB39A-201ENST00000320578 TBC1D3IA0A087WXS9 549 aa17.33■□□□□ 0.37
RAB39A-201ENST00000320578 TBC1D3EA0A087X179 549 aa17.33■□□□□ 0.37
RAB39A-201ENST00000320578 TBC1D3KA0A087X1G2 549 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms