RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ACAT2Q9BWD1 397 aa14.97□□□□□ -0.01
PDLIM5-202ENST00000318007 NCDNQ9UBB6 729 aa14.97□□□□□ -0.01
PDLIM5-202ENST00000318007 CPNE7Q9UBL6 633 aa14.97□□□□□ -0.01
PDLIM5-202ENST00000318007 KCNJ13O60928 360 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 BPGMP07738 259 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SYPP08247 313 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 ANXA5P08758 320 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 MAPK9P45984 424 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SP140Q13342 867 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 GPR18Q14330 331 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 RABEPKQ7Z6M1 372 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 LCA5Q86VQ0 697 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 ARFGAP2Q8N6H7 521 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 OR4E2Q8NGC2 313 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 RABEP2Q9H5N1 569 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 PCDH15Q96QU1 1955 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 GOLGA4Q13439 2230 aaKnown RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 EP300Q09472 2414 aaPredicted RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 TAPBPO15533 448 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SUPT7LO94864 414 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 CER1O95813 267 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 ATP5F1P24539 256 aaPredicted RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 IMPA1P29218 277 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 CCT8P50990 548 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 UNC5DQ6UXZ4 953 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 FAM20CQ8IXL6 584 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 TBC1D21Q8IYX1 336 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 CNPY4Q8N129 248 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SFRP1Q8N474 314 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 EID2Q8N6I1 236 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 OR10G6Q8NH81 332 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 MAPK15Q8TD08 544 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SAP25Q8TEE9 199 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 ZNF480Q8WV37 535 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 RHBDF1Q96CC6 855 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 CAMK1GQ96NX5 476 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 TMEM79Q9BSE2 394 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 CNOT10Q9H9A5 744 aaKnown RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 SEMA4BQ9NPR2 832 aaPredicted RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 OXSMQ9NWU1 459 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 NUDT4Q9NZJ9 180 aa14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 STOX2Q9P2F5 926 aaPredicted RBP14.96□□□□□ -0.01
PDLIM5-202ENST00000318007 TRIM38O00635 465 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PPP6CO00743 305 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 LYPLA1O75608 230 aaPredicted RBP14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 RPN2P04844 631 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 RETP07949 1114 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 DHRS4L1P0CG22 281 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 GIMD1P0DJR0 217 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PSMB5P28074 263 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 NAE1Q13564 534 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 GRB7Q14451 532 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 ZNF423Q2M1K9 1284 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PTCHD3Q3KNS1 767 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PLA2G2CQ5R387 149 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 AGTRAPQ6RW13 159 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 OR9A1PQ8NGU1 263 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 RAD51AP1Q96B01 352 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 LOXL4Q96JB6 756 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 TBC1D10AQ9BXI6 508 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PCDHGA5Q9Y5G8 931 aa14.95□□□□□ -0.02
PDLIM5-202ENST00000318007 PPM1DO15297 605 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 NOBOXO60393 691 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 WDR47O94967 919 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 FGF3P11487 239 aaPredicted RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 TYRP1P17643 537 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 YBX1P67809 324 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 COL9A2Q14055 689 aaPredicted RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 CFAP157Q5JU67 520 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 THEMIS2Q5TEJ8 643 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 LIPMQ5VYY2 423 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 IL27RAQ6UWB1 636 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 FAM47EQ6ZV65 393 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC35F3Q8IY50 421 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ARL14Q8N4G2 192 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 PPP4R1Q8TF05 950 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC40A1Q9NP59 571 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC22A14Q9Y267 594 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 FIS1Q9Y3D6 152 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 COLEC10Q9Y6Z7 277 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC16A5O15375 505 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 LMNAP02545 664 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ENO2P09104 434 aaPredicted RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ALDH4A1P30038 563 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 DPP6P42658 865 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 RXRGP48443 463 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 TBPL1P62380 186 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 C6orf132Q5T0Z8 1188 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 WASH2PQ6VEQ5 465 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 LINC01555Q8NAE3 123 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 PDPRQ8NCN5 879 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 MAGEC3Q8TD91 643 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 LCN9Q8WX39 176 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 PRR11Q96HE9 360 aaPredicted RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 CCDC138Q96M89 665 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms