RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NR1H4Q96RI1 486 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 UHRF1Q96T88 793 aaPredicted RBP18.94■□□□□ 0.62
HOXC4-201ENST00000303406 PCDHAC1Q9H158 963 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 TMED5Q9Y3A6 229 aa18.94■□□□□ 0.62
HOXC4-201ENST00000303406 TCF20Q9UGU0 1960 aaKnown RBP18.93■□□□□ 0.62
HOXC4-201ENST00000303406 C17orf113A0A1B0GUU1 675 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 ARHGEF33A8MVX0 844 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 FFAR3O14843 346 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 GPR42O15529 346 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 LILRB5O75023 590 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 GRIA2P42262 883 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 IL12RB1P42701 662 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 CLNS1AP54105 237 aaKnown RBP18.93■□□□□ 0.62
HOXC4-201ENST00000303406 PFN3P60673 137 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 MRPS35P82673 323 aaKnown RBP18.93■□□□□ 0.62
HOXC4-201ENST00000303406 FXNQ16595 210 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 TIGD2Q4W5G0 525 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 ZNF648Q5T619 568 aaPredicted RBP18.93■□□□□ 0.62
HOXC4-201ENST00000303406 ANO7Q6IWH7 933 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 OR2T34Q8NGX1 318 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 OR2T3Q8NH03 318 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 VPS33AQ96AX1 596 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 ELSPBP1Q96BH3 223 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 LRCH3Q96II8 777 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 SLC39A3Q9BRY0 314 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 EFHD1Q9BUP0 239 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 TRIM39Q9HCM9 518 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 PRSS16Q9NQE7 514 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 ACTR3BQ9P1U1 418 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 CNOT11Q9UKZ1 510 aaKnown RBP18.93■□□□□ 0.62
HOXC4-201ENST00000303406 AP4S1Q9Y587 144 aa18.93■□□□□ 0.62
HOXC4-201ENST00000303406 C9JVG2 144 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 NPC1O15118 1278 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 VEGFDO43915 354 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 LZTS3O60299 673 aaPredicted RBP18.92■□□□□ 0.62
HOXC4-201ENST00000303406 KAT7O95251 611 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 PRPS2P11908 318 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 JUPP14923 745 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 MAPK1P28482 360 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 GPR1P46091 355 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 METAP1P53582 386 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 ENPP2Q13822 863 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 GTF2H3Q13889 308 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 LPCAT4Q643R3 524 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 TICAM1Q8IUC6 712 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 HID1Q8IV36 788 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 DNAJB8Q8NHS0 232 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 CXorf40AQ8TE69 158 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 SELENOMQ8WWX9 145 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 CMTM7Q96FZ5 175 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 ELOVL6Q9H5J4 265 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 GPR34Q9UPC5 381 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 DTNAQ9Y4J8 743 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 LRRK1Q38SD2 2015 aa18.92■□□□□ 0.62
HOXC4-201ENST00000303406 TMEM202A6NGA9 273 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 AP1G1O43747 822 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 PDYNP01213 254 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 PSMC3P17980 439 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 PWP1Q13610 501 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 USP39Q53GS9 565 aaKnown RBP18.91■□□□□ 0.62
HOXC4-201ENST00000303406 SFT2D3Q587I9 215 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.91■□□□□ 0.62
HOXC4-201ENST00000303406 RAET1GQ6H3X3 334 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 TMEM102Q8N9M5 508 aaPredicted RBP18.91■□□□□ 0.62
HOXC4-201ENST00000303406 METTL2AQ96IZ6 378 aaKnown RBP18.91■□□□□ 0.62
HOXC4-201ENST00000303406 HBEGFQ99075 208 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 ACPTQ9BZG2 426 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 IL1RL2Q9HB29 575 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 FARSBQ9NSD9 589 aaKnown RBP18.91■□□□□ 0.62
HOXC4-201ENST00000303406 ARMC1Q9NVT9 282 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 GPRC5BQ9NZH0 403 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 SLC22A14Q9Y267 594 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 AP3M1Q9Y2T2 418 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 FADS3Q9Y5Q0 445 aa18.91■□□□□ 0.62
HOXC4-201ENST00000303406 EPOPA6NHQ4 379 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 INPP4BO15327 924 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 SEC22BO75396 215 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 IL6P05231 212 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HMGCS1Q01581 520 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 CSTF3Q12996 717 aaKnown RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 E2F2Q14209 437 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 CAPRIN1Q14444 709 aaKnown RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 CPSF6Q16630 551 aaKnown RBP eCLIP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 ADAMTSL4Q6UY14 1074 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 LILRA2Q8N149 483 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 OR56A3Q8NH54 315 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 FCRL1Q96LA6 429 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 PKP2Q99959 881 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 DPY30Q9C005 99 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 IGFLR1Q9H665 355 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 CLMPQ9H6B4 373 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 COPS7BQ9H9Q2 264 aaPredicted RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 STOX2Q9P2F5 926 aaPredicted RBP18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HCN2Q9UL51 889 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 COQ6Q9Y2Z9 468 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 H0YJX3 145 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 MMP20O60882 483 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 APODP05090 189 aa18.9■□□□□ 0.62
HOXC4-201ENST00000303406 HSD3B1P14060 373 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms