RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 WISP3O95389 354 aaPredicted RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PRR35P0CG20 571 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 DMC1Q14565 340 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SMUG1Q53HV7 270 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 DALRD3Q5D0E6 543 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 UBXN11Q5T124 520 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 NXNL2Q5VZ03 156 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PIANPQ8IYJ0 282 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 LPCAT1Q8NF37 534 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 BTBD2Q9BX70 525 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 NSUN3Q9H649 340 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 MOV10Q9HCE1 1003 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 QPCTLQ9NXS2 382 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 TAS2R16Q9NYV7 291 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 FKBPLQ9UIM3 349 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 WBP11Q9Y2W2 641 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 EIF2S1P05198 315 aaKnown RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SMPD1P17405 629 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 OR1E1P30953 314 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 HUNKP57058 714 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 RAB41Q5JT25 222 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ATAD3CQ5T2N8 411 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF648Q5T619 568 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 PSAPL1Q6NUJ1 521 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 GOLGA7Q7Z5G4 137 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 RASAL3Q86YV0 1011 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 TRIB2Q92519 343 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 MROH8Q9H579 483 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SP140LQ9H930 580 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 BTBD3Q9Y2F9 522 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 TANC1Q9C0D5 1861 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 NFKBIEO00221 500 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 E2F3O00716 465 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 HOXC11O43248 304 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 RAMP2O60895 175 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 NBNO60934 754 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SCELO95171 688 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 THP07101 528 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 KCNE1P15382 129 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 CTSKP43235 329 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 CASP9P55211 416 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 GBX1Q14549 363 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 CPSF6Q16630 551 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SYT6Q5T7P8 510 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 DOK6Q6PKX4 331 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 LRRTM3Q86VH5 581 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 GALNT12Q8IXK2 581 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 DPP10Q8N608 796 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 PYURFQ96I23 114 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SPATA17Q96L03 361 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 NEDD4LQ96PU5 975 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF646O15015 1829 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 KRT87PA6NCN2 255 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 CTDSP2O14595 271 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 MMP3P08254 477 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF33AQ06730 810 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 PLEKHG6Q3KR16 790 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 BCL7AQ4VC05 210 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ELMOD1Q8N336 334 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ASCC1Q8N9N2 400 aaKnown RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 OR52J3Q8NH60 311 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 DNASE1L2Q92874 299 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 SLC38A4Q969I6 547 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 DCAF13Q9NV06 445 aaKnown RBP14.35□□□□□ -0.11
COL6A2-201ENST00000300527 C1orf109Q9NX04 203 aa14.35□□□□□ -0.11
COL6A2-201ENST00000300527 MYLKQ15746 1914 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 F8W810 466 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PKMP14618 531 aaKnown RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 RYKP34925 604 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 GTF2H2Q13888 395 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 RFX4Q33E94 735 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ARMC4Q5T2S8 1044 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 GTF2H2CQ6P1K8 395 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MSRB3Q8IXL7 192 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 OR8J3Q8NGG0 315 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 DPH2Q9BQC3 489 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 GORASP2Q9H8Y8 452 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MOSPD1Q9UJG1 213 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MICAL3Q7RTP6 2002 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CXCR2P25025 360 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MC4RP32245 332 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 GRK5P34947 590 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 GPR15P49685 360 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CAMK2BQ13554 666 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 SETMARQ53H47 684 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CPZQ66K79 652 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms