RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DLG1Q12959 904 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LRRC57Q8N9N7 239 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HNRNPABQ99729 332 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC2A6Q9UGQ3 507 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TPD52L2O43399 206 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RPL10P27635 214 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GRK6P43250 576 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NDST2P52849 883 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC10A7Q0GE19 358 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DNASE1L3Q13609 305 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ASB18Q6ZVZ8 466 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CENPNQ96H22 339 aaPredicted RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ATXN10Q9UBB4 475 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PCDH7O60245 1069 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CBLP22681 906 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SOWAHAQ2M3V2 549 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FRMD7Q6ZUT3 714 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 INTS10Q9NVR2 710 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCDC59Q9P031 241 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CXorf49A8MYA2 514 aaPredicted RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PCDHGA12O60330 932 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TULP3O75386 442 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EFHD2Q96C19 240 aaPredicted RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C1orf109Q9NX04 203 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RCOR3Q9P2K3 495 aaPredicted RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR7A10O76100 309 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SCGB1D2O95969 90 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KLK1P06870 262 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KHKP50053 298 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MAZP56270 477 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 VBP1P61758 197 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LRRC32Q14392 662 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ANKRD26P1Q6NSI1 321 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 UFD1Q92890 307 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MNTQ99583 582 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IL12RB2Q99665 862 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DUSP26Q9BV47 211 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RIOK2Q9BVS4 552 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PLK4O00444 970 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CH25HO95992 272 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C8orf89P0DMQ9 161 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GGT5P36269 586 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CDKN1CP49918 316 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 XIAPP98170 497 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FOXRED2Q8IWF2 684 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NXPE1Q8N323 547 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 BARD1Q99728 777 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MRIQ9BWK5 157 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TCF7L1Q9HCS4 588 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DAPL1A0PJW8 107 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NDUFS4O43181 175 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PRH1P02810 166 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 INHAP05111 366 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 L1CAMP32004 1257 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 BRSK1Q8TDC3 778 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC13A3Q8WWT9 602 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MAGEH1Q9H213 219 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCSER2Q9H7U1 834 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF395Q9H8N7 513 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CPED1A4D0V7 1026 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FABP12A6NFH5 140 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 J3KR12 359 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IL10RBQ08334 325 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 FAM110CQ1W6H9 321 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 COLEC12Q5KU26 742 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PAQR3Q6TCH7 311 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DPYSL5Q9BPU6 564 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KXD1Q9BQD3 176 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EBF2Q9HAK2 575 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ERVW-1Q9UQF0 538 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PPP2R2DQ66LE6 453 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SH3RF2Q8TEC5 729 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MGME1Q9BQP7 344 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TTYH2Q9BSA4 534 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 A0A0J9YVX5 310 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PPEF2O14830 753 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CBFA2T3O75081 653 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DIRAS1O95057 198 aa13.31□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC6A9P48067 706 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms