RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PLPP4Q5VZY2 271 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF517Q6ZMY9 492 aaPredicted RBP5.46□□□□□ -1.53
CPSF2-201ENST00000298875 ECHDC2Q86YB7 292 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 SLC33A1O00400 549 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PER2O15055 1255 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SSX5O60225 188 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TPSB2P20231 275 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CFL1P23528 166 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SPAM1P38567 509 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TPSAB1Q15661 275 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SSX2Q16385 188 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 EIPR1Q53HC9 387 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 IL23RQ5VWK5 629 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 FOXR2Q6PJQ5 311 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SLC26A9Q7LBE3 791 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 OR6K6Q8NGW6 343 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GATAD2BQ8WXI9 593 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TRIM43Q96BQ3 446 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 COPS8Q99627 209 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CFAP97Q9P2B7 532 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CYTH4Q9UIA0 394 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 FBXO5Q9UKT4 447 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 KANTRA0A1W2PQU2 76 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SH3PXD2BA1X283 911 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SCELO95171 688 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 FUT4P22083 530 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 MAGEA6P43360 314 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ARCN1P48444 511 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 HSPA7P48741 367 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 IDH3AP50213 366 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SULT2A1Q06520 285 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 KLF1Q13351 362 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GRM3Q14832 879 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PAOXQ6QHF9 649 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CXCL17Q6UXB2 119 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ASB18Q6ZVZ8 466 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 MON1BQ7L1V2 547 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ASB12Q8WXK4 309 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ZNF717Q9BY31 904 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RNF38Q9H0F5 515 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ABHD16BQ9H3Z7 469 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CHRAC1Q9NRG0 131 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GDAP2Q9NXN4 497 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ABI3Q9P2A4 366 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SIX4Q9UIU6 781 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 LRRC72A6NJI9 287 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 STMND1H3BQB6 276 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CCL22O00626 93 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RAP2AP10114 183 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SLC2A2P11168 524 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 LNX2Q8N448 690 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 FAM84AQ96KN4 292 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GAL3ST4Q96RP7 486 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PTPN18Q99952 460 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SYT4Q9H2B2 425 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ACSL5Q9ULC5 683 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 LOC100509620A0A075B734 347 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TPPPO94811 219 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PTPRAP18433 802 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 XKP51811 444 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TARBP2Q15633 366 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 DNAJB8Q8NHS0 232 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 HIST1H2AAQ96QV6 131 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ABCG4Q9H172 646 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RNF121Q9H920 327 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CXorf21Q9HAI6 301 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TREM1Q9NP99 234 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PARPBPQ9NWS1 579 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TIMM8BQ9Y5J9 83 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 MICAL3Q7RTP6 2002 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 BTBD19C9JJ37 291 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RP2O75695 350 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TPTEP56180 551 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 STOML3Q8TAV4 291 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 ROPN1LQ96C74 230 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 BTN2A3PQ96KV6 586 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RC3H2Q9HBD1 1191 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 KCNQ5Q9NR82 932 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 PNO1Q9NRX1 252 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 MSRAQ9UJ68 235 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 RIMKLBQ9ULI2 386 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SEPT4O43236 478 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CHRM5P08912 532 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 NMBRP28336 390 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CLCQ05315 142 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 TARDBPQ13148 414 aaKnown RBP eCLIP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SLC1A5Q15758 541 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 HFE2Q6ZVN8 426 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 CAND1Q86VP6 1230 aaKnown RBP5.46□□□□□ -1.54
CPSF2-201ENST00000298875 XYLT1Q86Y38 959 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 OR2AJ1Q8NGZ0 328 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GRHL3Q8TE85 626 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 COQ10BQ9H8M1 238 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 BIN3Q9NQY0 253 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 KCTD5Q9NXV2 234 aa5.46□□□□□ -1.54
CPSF2-201ENST00000298875 GJB1P08034 283 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms