RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 UNC5AQ6ZN44 842 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 PPP1R32Q7Z5V6 425 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 AMIGO1Q86WK6 493 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CNGA4Q8IV77 575 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 DTWD1Q8N5C7 304 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 C19orf47Q8N9M1 422 aaKnown RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 LRRC57Q8N9N7 239 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 LKAAEAR1Q8TD35 194 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 TFGQ92734 400 aaPredicted RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 PNPLA2Q96AD5 504 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ULK4Q96C45 1275 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CDKN2AIPNLQ96HQ2 116 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 BARD1Q99728 777 aaKnown RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 C19orf43Q9BQ61 176 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ZNF552Q9H707 407 aaPredicted RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 NLE1Q9NVX2 485 aaPredicted RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 DHCR7Q9UBM7 475 aaKnown RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 PLAGL1Q9UM63 463 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CDYLQ9Y232 598 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ZNF451Q9Y4E5 1061 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 PCDHGB7Q9Y5F8 929 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 HEBP2Q9Y5Z4 205 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ANKRD12Q6UB98 2062 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ABCA12Q86UK0 2595 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CROCCQ5TZA2 2017 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 FBN2P35556 2912 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 SLC5A10A0PJK1 596 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 GRID2IPA4D2P6 1211 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MROH6A6NGR9 719 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 C2orf74A8MZ97 194 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MATN2O00339 956 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 OR1I1O60431 355 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 DPM1O60762 260 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 ALOX12BO75342 701 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MED26O95402 600 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CBX6O95503 412 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CRTAMO95727 393 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CHRM5P08912 532 aaPredicted RBP8.63□□□□□ -1.03
TPM3-201ENST00000271850 CYP2A7P20853 494 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CTNNA2P26232 953 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 OTX2P32243 289 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 PRKAA1Q13131 559 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 KLF1Q13351 362 aaPredicted RBP8.63□□□□□ -1.03
TPM3-201ENST00000271850 SEMA3AQ14563 771 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 SLC9A5Q14940 896 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 NR6A1Q15406 480 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.63□□□□□ -1.032e-17■□□□□ 10.2
TPM3-201ENST00000271850 ZRANB3Q5FWF4 1079 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 RHBDD2Q6NTF9 364 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 RAD9BQ6WBX8 426 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MED25Q71SY5 747 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 COX15Q7KZN9 410 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 VRK3Q8IV63 474 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CDKL3Q8IVW4 592 aaPredicted RBP8.63□□□□□ -1.03
TPM3-201ENST00000271850 DNAJC22Q8N4W6 341 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 TMEM102Q8N9M5 508 aaPredicted RBP8.63□□□□□ -1.03
TPM3-201ENST00000271850 LINC01555Q8NAE3 123 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 OR13J1Q8NGT2 312 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 DCUN1D1Q96GG9 259 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 ZNF778Q96MU6 729 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MVB12BQ9H7P6 319 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 FANCEQ9HB96 536 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 SYTL2Q9HCH5 934 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 ASF1BQ9NVP2 202 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 GPR83Q9NYM4 423 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 SLC2A6Q9UGQ3 507 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 EFR3BQ9Y2G0 817 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 KLHL20Q9Y2M5 609 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 AAR2Q9Y312 384 aaKnown RBP8.63□□□□□ -1.03
TPM3-201ENST00000271850 NUP210LQ5VU65 1888 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 DOCK10Q96BY6 2186 aa8.63□□□□□ -1.03
TPM3-201ENST00000271850 MDC1Q14676 2089 aaKnown RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 MACROD2A1Z1Q3 448 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 CCDC162PA2VCL2 907 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 KRT87PA6NCN2 255 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 NRP2O60462 931 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 HADHAP40939 763 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 GRIA1P42261 906 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 TNNT3P45378 269 aaPredicted RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 RPA4Q13156 261 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 KRT33BQ14525 404 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 POU6F1Q14863 301 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 BRD3Q15059 726 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 GPR33Q49SQ1 333 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 DCAF10Q5QP82 559 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 VWA5B1Q5TIE3 1220 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 DARS2Q6PI48 645 aaKnown RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 SARM1Q6SZW1 724 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 ZNF534Q76KX8 674 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 CUZD1Q86UP6 607 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 GALNT16Q8N428 558 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 CISD2Q8N5K1 135 aaKnown RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 ZNF655Q8N720 491 aaPredicted RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 AMER2Q8N7J2 671 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 FAM71DQ8N9W8 422 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 ACRBPQ8NEB7 543 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms